RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 JAKMIP1Q96N16 626 aaKnown RBP18.83■□□□□ 0.6
MRPL55-220ENST00000411464 SLC26A6Q9BXS9 759 aa18.83■□□□□ 0.6
MRPL55-220ENST00000411464 CHST12Q9NRB3 414 aa18.83■□□□□ 0.6
MRPL55-220ENST00000411464 SORCS3Q9UPU3 1222 aa18.83■□□□□ 0.6
MRPL55-220ENST00000411464 CARNS1A5YM72 827 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 NUBP1P53384 320 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 VPS52Q8N1B4 723 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 SLC5A5Q92911 643 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 RNF26Q9BY78 433 aaPredicted RBP18.82■□□□□ 0.6
MRPL55-220ENST00000411464 UNC45AQ9H3U1 944 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 POMKQ9H5K3 350 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 FAM86C1Q9NVL1 165 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 SEPT9Q9UHD8 586 aaPredicted RBP18.82■□□□□ 0.6
MRPL55-220ENST00000411464 CDH22Q9UJ99 828 aa18.82■□□□□ 0.6
MRPL55-220ENST00000411464 C2CD4DB7Z1M9 353 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 ZC3H11AO75152 810 aaKnown RBP eCLIP18.81■□□□□ 0.6
MRPL55-220ENST00000411464 SKIP12755 728 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 PHKA2P46019 1235 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 NLRP5P59047 1200 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 GIT2Q14161 759 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 TARBP2Q15633 366 aaKnown RBP18.81■□□□□ 0.6
MRPL55-220ENST00000411464 MTERF2Q49AM1 385 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 XKR3Q5GH77 459 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 ATAT1Q5SQI0 421 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 TWF2Q6IBS0 349 aaKnown RBP18.81■□□□□ 0.6
MRPL55-220ENST00000411464 MIER3Q7Z3K6 550 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 SKAP1Q86WV1 359 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 RDM1Q8NG50 284 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 NIFKQ9BYG3 293 aaKnown RBP18.81■□□□□ 0.6
MRPL55-220ENST00000411464 INO80BQ9C086 356 aaPredicted RBP18.81■□□□□ 0.6
MRPL55-220ENST00000411464 VPS54Q9P1Q0 977 aa18.81■□□□□ 0.6
MRPL55-220ENST00000411464 FNDC1Q4ZHG4 1894 aaPredicted RBP18.81■□□□□ 0.6
MRPL55-220ENST00000411464 LOXHD1Q8IVV2 1947 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.8■□□□□ 0.6
MRPL55-220ENST00000411464 GFRA3O60609 400 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 PDGFBP01127 241 aaPredicted RBP18.8■□□□□ 0.6
MRPL55-220ENST00000411464 SFPQP23246 707 aaKnown RBP eCLIP18.8■□□□□ 0.6
MRPL55-220ENST00000411464 POLGP54098 1239 aaPredicted RBP18.8■□□□□ 0.6
MRPL55-220ENST00000411464 DRP2Q13474 957 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 NTRK3Q16288 839 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 RARS2Q5T160 578 aaKnown RBP18.8■□□□□ 0.6
MRPL55-220ENST00000411464 GLB1LQ6UWU2 654 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 FBXL16Q8N461 479 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 GJA10Q969M2 543 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 TRAIPQ9BWF2 469 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 SH3GLB2Q9NR46 395 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 DZANK1Q9NVP4 752 aa18.8■□□□□ 0.6
MRPL55-220ENST00000411464 A0A087WZ62 844 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 H0Y858 1186 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 EDIL3O43854 480 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 PSMD10O75832 226 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 BRD1O95696 1058 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 WEE2P0C1S8 567 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 IFNAR1P17181 557 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 RNASELQ05823 741 aaKnown RBP18.79■□□□□ 0.6
MRPL55-220ENST00000411464 LONRF3Q496Y0 759 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 DDX53Q86TM3 631 aaKnown RBP18.79■□□□□ 0.6
MRPL55-220ENST00000411464 C12orf76Q8N812 135 aaPredicted RBP18.79■□□□□ 0.6
MRPL55-220ENST00000411464 TBCKQ8TEA7 893 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 KCNB2Q92953 911 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 LPPQ93052 612 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 FDXACB1Q9BRP7 624 aaPredicted RBP18.79■□□□□ 0.6
MRPL55-220ENST00000411464 ZBP1Q9H171 429 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 SUCLA2Q9P2R7 463 aaPredicted RBP18.79■□□□□ 0.6
MRPL55-220ENST00000411464 LIMD1Q9UGP4 676 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 DBR1Q9UK59 544 aaKnown RBP18.79■□□□□ 0.6
MRPL55-220ENST00000411464 PIN4Q9Y237 131 aaKnown RBP18.79■□□□□ 0.6
MRPL55-220ENST00000411464 SNX14Q9Y5W7 946 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 IRAK3Q9Y616 596 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 NID2Q14112 1375 aa18.79■□□□□ 0.6
MRPL55-220ENST00000411464 ZDBF2Q9HCK1 2354 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 DDX11L8A8MPP1 907 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 CTSAP10619 480 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 RPS6KB1P23443 525 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 HSPA4P34932 840 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 Q4G0T1 1027 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 NOMO2Q5JPE7 1267 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 CENPQQ7L2Z9 268 aaPredicted RBP18.78■□□□□ 0.6
MRPL55-220ENST00000411464 ZNF410Q86VK4 478 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 RHPN2Q8IUC4 686 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 ZDHHC14Q8IZN3 488 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 PLCD3Q8N3E9 789 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 TDRD5Q8NAT2 981 aaKnown RBP18.78■□□□□ 0.6
MRPL55-220ENST00000411464 AUTS2Q8WXX7 1259 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 IGSF21Q96ID5 467 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 SH2D3AQ9BRG2 576 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 INPP5FQ9Y2H2 1132 aa18.78■□□□□ 0.6
MRPL55-220ENST00000411464 IGKV6-21A0A0C4DH24 114 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 TMEM150BA6NC51 233 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 GALR2O43603 387 aaPredicted RBP18.77■□□□□ 0.6
MRPL55-220ENST00000411464 GALTP07902 379 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 PSMA5P28066 241 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 RAB27AP51159 221 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 CCT2P78371 535 aaKnown RBP18.77■□□□□ 0.6
MRPL55-220ENST00000411464 KIAA1841Q6NSI8 718 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 CATSPER4Q7RTX7 472 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 CABP7Q86V35 215 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 PPFIBP1Q86W92 1011 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 TMEM173Q86WV6 379 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms