RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 TCIRG1Q13488 830 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 ETFDHQ16134 617 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 MTX3Q5HYI7 312 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 BTBD8Q5XKL5 378 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 LRSAM1Q6UWE0 723 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 MEPCEQ7L2J0 689 aaKnown RBP3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 GDF7Q7Z4P5 450 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 WDR48Q8TAF3 677 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 GCDHQ92947 438 aaPredicted RBP3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 CCDC140Q96MF4 163 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 TRPM5Q9NZQ8 1165 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 GGT7Q9UJ14 662 aa3.01□□□□□ -1.93
RNU4-61P-201ENST00000411243 C2orf78A6NCI8 922 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 UNC119BA6NIH7 251 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 FAM90A27PA6NNH2 459 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 GOLGA8BA8MQT2 603 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 MSCO60682 206 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 APOBEC3AP31941 199 aaPredicted RBP3□□□□□ -1.93
RNU4-61P-201ENST00000411243 TUBA4AP68366 448 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 TP53BP2Q13625 1128 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 SF1Q15637 639 aaKnown RBP3□□□□□ -1.93
RNU4-61P-201ENST00000411243 TMEM145Q8NBT3 493 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 CPEB3Q8NE35 698 aaKnown RBP3□□□□□ -1.93
RNU4-61P-201ENST00000411243 SPON2Q9BUD6 331 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 GPR27Q9NS67 375 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 RCAN3Q9UKA8 241 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 RBM8AQ9Y5S9 174 aaKnown RBP3□□□□□ -1.93
RNU4-61P-201ENST00000411243 NOTCH4Q99466 2003 aa3□□□□□ -1.93
RNU4-61P-201ENST00000411243 H2AFYO75367 372 aaKnown RBP2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 ITPKBP27987 946 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 METTL24Q5JXM2 366 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 SLC35F1Q5T1Q4 408 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 PIK3R6Q5UE93 754 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 ZNF626Q68DY1 528 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 SH3RF2Q8TEC5 729 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 RPL36ALQ969Q0 106 aaKnown RBP2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 PPP1R14AQ96A00 147 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 ARL8AQ96BM9 186 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 ADAM2Q99965 735 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 NDC1Q9BTX1 674 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 HIRIP3Q9BW71 556 aaPredicted RBP2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 FOXJ2Q9P0K8 574 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 SLC17A6Q9P2U8 582 aa2.99□□□□□ -1.93
RNU4-61P-201ENST00000411243 KCNJ6P48051 423 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 SPIDRQ14159 915 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 KRT71Q3SY84 523 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 VHLLQ6RSH7 139 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 HS2ST1Q7LGA3 356 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 PLXDC1Q8IUK5 500 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 RBMXL3Q8N7X1 1067 aaKnown RBP2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 HASPINQ8TF76 798 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 TMEM255BQ8WV15 326 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 GFM2Q969S9 779 aaKnown RBP2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 DCLRE1CQ96SD1 692 aaKnown RBP2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 KCNJ15Q99712 375 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 MRS2Q9HD23 443 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 RIC8BQ9NVN3 520 aa2.98□□□□□ -1.93
RNU4-61P-201ENST00000411243 MANSC4A6NHS7 340 aaPredicted RBP2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 SPDEFO95238 335 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 VSIG10L2P0DP72 767 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 DDX6P26196 483 aaKnown RBP eCLIP2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 DGKKQ5KSL6 1271 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 GSG1LQ6UXU4 331 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 ZNF227Q86WZ6 799 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 OR52N2Q8NGI0 321 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 PDLIM2Q96JY6 352 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 FLRT1Q9NZU1 646 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 TBC1D30Q9Y2I9 924 aa2.97□□□□□ -1.93
RNU4-61P-201ENST00000411243 STC2O76061 302 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 TNFRSF1BP20333 461 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 HERVK_113P62684 666 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 MAP3K12Q12852 859 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 VPS72Q15906 364 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 VGLL2Q8N8G2 317 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 CPEB1Q9BZB8 566 aaKnown RBP2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 HAPLN2Q9GZV7 340 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 EBF3Q9H4W6 596 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 ASB6Q9NWX5 421 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 SRPK3Q9UPE1 567 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 BTBD3Q9Y2F9 522 aa2.96□□□□□ -1.94
RNU4-61P-201ENST00000411243 CACNA1IQ9P0X4 2223 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 MARCH11A6NNE9 402 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 WNT9AO14904 365 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 TOX4O94842 621 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 GAS8-AS1O95177 125 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 ITGAMP11215 1152 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 DDB1Q16531 1140 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 KIZQ2M2Z5 673 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 SEMA6DQ8NFY4 1073 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 PDCD2LQ9BRP1 358 aa2.95□□□□□ -1.94
RNU4-61P-201ENST00000411243 TCRBV5S4A2TA0A5A2 114 aa2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 PRKCGP05129 697 aa2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 JUNP05412 331 aaKnown RBP2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 PRR35P0CG20 571 aa2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 ZSCAN20P17040 1043 aaPredicted RBP2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 FDXRP22570 491 aa2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 PDE4CQ08493 712 aa2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 SCAPQ12770 1279 aa2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 SLC9A4Q6AI14 798 aa2.94□□□□□ -1.94
RNU4-61P-201ENST00000411243 FBXL22Q6P050 247 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms