RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ZNF276Q8N554 614 aa2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 HAS1Q92839 578 aa2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 GCDHQ92947 438 aaPredicted RBP2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 SLC7A6OSQ96CW6 309 aaPredicted RBP2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 MAML3Q96JK9 1138 aa2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 C16orf92Q96LL3 132 aa2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 IPO9Q96P70 1041 aaKnown RBP2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 PRRX2Q99811 253 aa2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 TCF25Q9BQ70 676 aa2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 CPEB1Q9BZB8 566 aaKnown RBP2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 AURKAIP1Q9NWT8 199 aaPredicted RBP2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 SNTG2Q9NY99 539 aa2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 H2AFY2Q9P0M6 372 aaPredicted RBP2.44□□□□□ -2.02
RNU2-55P-201ENST00000411146 CENPVL1A0A0U1RR11 272 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 LEFTY2O00292 366 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 H2AFYO75367 372 aaKnown RBP2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 SDSP20132 328 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 FBLP22087 321 aaKnown RBP2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 RBM25P49756 843 aaKnown RBP2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 ZC3H6P61129 1189 aaKnown RBP2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 NAALADL2Q58DX5 795 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 CREB3L3Q68CJ9 461 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 SLFN12LQ6IEE8 588 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 ESRP1Q6NXG1 681 aaKnown RBP2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 XYLT1Q86Y38 959 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 CKAP2LQ8IYA6 745 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 ANKRD35Q8N283 1001 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 BEND2Q8NDZ0 799 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 PIK3C3Q8NEB9 887 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 MDGA1Q8NFP4 955 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 CPT1CQ8TCG5 803 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 CALML6Q8TD86 181 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 SLC25A43Q8WUT9 341 aaPredicted RBP2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 DYDC2Q96IM9 177 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 FOXB1Q99853 325 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 ENKD1Q9H0I2 346 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 MS4A5Q9H3V2 200 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 ANKFY1Q9P2R3 1169 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 PPP1R1BQ9UD71 204 aaPredicted RBP2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 SORCS3Q9UPU3 1222 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 VWA7Q9Y334 891 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 HS3ST4Q9Y661 456 aa2.43□□□□□ -2.02
RNU2-55P-201ENST00000411146 PTPDC1A2A3K4 754 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 ELL2O00472 640 aaPredicted RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 KIAA0355O15063 1070 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 CYP27B1O15528 508 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 PPFIA2O75334 1257 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 MAFO75444 373 aaPredicted RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 DNAJC8O75937 253 aaPredicted RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 PEX11BO96011 259 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 LMNAP02545 664 aaKnown RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 VSIG10L2P0DP72 767 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 ZNF37AP17032 561 aaPredicted RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 GTF2F1P35269 517 aaKnown RBP eCLIP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 CASRP41180 1078 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 KIR2DL3P43628 341 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 CD69Q07108 199 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 DGKDQ16760 1214 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 NBPF6Q5VWK0 638 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 PRAMEF9Q5VWM5 478 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 OLFML1Q6UWY5 402 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 HTR3DQ70Z44 454 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 SYT12Q8IV01 421 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 CMTM4Q8IZR5 234 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 LILRA3Q8N6C8 439 aaPredicted RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 JMYQ8N9B5 988 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 PROKR1Q8TCW9 393 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 RTF1Q92541 710 aaKnown RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 GFM2Q969S9 779 aaKnown RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 LENG9Q96B70 501 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 NBPF4Q96M43 638 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 WDR92Q96MX6 357 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 BBC3Q96PG8 261 aaPredicted RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 DEPDC7Q96QD5 511 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 TUBGCP5Q96RT8 1024 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 ELF4Q99607 663 aaPredicted RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 MYL10Q9BUA6 226 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 BOCQ9BWV1 1114 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 LSM14BQ9BX40 385 aaKnown RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 HAPLN2Q9GZV7 340 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 SAMD15Q9P1V8 674 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 RCAN3Q9UKA8 241 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 TNPO3Q9Y5L0 923 aaKnown RBP2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 SALL3Q9BXA9 1300 aa2.42□□□□□ -2.02
RNU2-55P-201ENST00000411146 SETD1BQ9UPS6 1966 aaKnown RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 UBA6A0AVT1 1052 aaPredicted RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 TMEM191CA6NGB0 347 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 WNT10BO00744 389 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 PPP1R12AO14974 1030 aaPredicted RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 HOXA3O43365 443 aaPredicted RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 KCNQ2O43526 872 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 HIP1RO75146 1068 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 PRPF6O94906 941 aaKnown RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 SCAF4O95104 1147 aaKnown RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 APOL3O95236 402 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 GAAP10253 952 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 LMO1P25800 156 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 APOBEC3AP31941 199 aaPredicted RBP2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 C21orf62-AS1Q17RA5 79 aa2.41□□□□□ -2.02
RNU2-55P-201ENST00000411146 CCDC142Q17RM4 750 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms