RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 NFASCO94856 1347 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NLRC5Q86WI3 1866 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 BAZ2BQ9UIF8 2168 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 IGKV6D-21A0A0A0MT36 114 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CCDC195A0A1B0GUA6 201 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM170BA6NMN3 283 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ANHXE9PGG2 379 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 HIP1O00291 1037 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 IFIT3O14879 490 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 INPPL1O15357 1258 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAGEB2O15479 319 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 LILRB3O75022 631 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 N4BP1O75113 896 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 LRRN2O75325 713 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GPR32O75388 356 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ATG7O95352 703 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 C22orf31O95567 290 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GLUD1P00367 558 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 VTNP04004 478 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ALDH2P05091 517 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SSBP05455 408 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 URODP06132 367 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GALTP07902 379 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 RETP07949 1114 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CNPP09543 421 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SKIP12755 728 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 DARSP14868 501 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GLULP15104 373 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 TGM1P22735 817 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 EIF4BP23588 611 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SMARCA1P28370 1054 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 KIF5BP33176 963 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC11A1P49279 550 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GNAQP50148 359 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PDE1AP54750 535 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 AK2P54819 239 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NRLP54845 237 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NLRP11P59045 1033 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GPC5P78333 572 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SHC2P98077 582 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CDC42EP1Q00587 391 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PFKPQ01813 784 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 RNASELQ05823 741 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 TROAPQ12815 778 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SNW1Q13573 536 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 HTR4Q13639 388 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PPP2R5DQ14738 602 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 UBXN2BQ14CS0 331 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 WTAPQ15007 396 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SART3Q15020 963 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 MLF2Q15773 248 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CEP55Q53EZ4 464 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC44A4Q53GD3 710 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NOMO2Q5JPE7 1267 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CLLU1OSQ5K130 101 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZBTB41Q5SVQ8 909 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ANKRD45Q5TZF3 282 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 LAIR1Q6GTX8 287 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SWSAP1Q6NVH7 229 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 EFCAB12Q6NXP0 572 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GLB1LQ6UWU2 654 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CWC27Q6UX04 472 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 RSPO2Q6UXX9 243 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 TRMT1LQ7Z2T5 733 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF598Q86UK7 904 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 TMEM173Q86WV6 379 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAML2Q8IZL2 1156 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CELF5Q8N6W0 485 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CTCFLQ8NI51 663 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 FEZF2Q8TBJ5 459 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 HDAC7Q8WUI4 952 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 BBXQ8WY36 941 aaPredicted RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SMG7Q92540 1137 aaKnown RBP2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NELL1Q92832 810 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PHKBQ93100 1093 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SCLT1Q96NL6 688 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 RPS6KC1Q96S38 1066 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 MYADMQ96S97 322 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 LZTS2Q9BRK4 669 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 TRAIPQ9BWF2 469 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPZ1Q9BXG8 430 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 FOXQ1Q9C009 403 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 GBP3Q9H0R5 595 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ADAMTS10Q9H324 1103 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PLEKHA4Q9H4M7 779 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 NRDE2Q9H7Z3 1164 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PIDD1Q9HB75 910 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PARD6AQ9NPB6 346 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 LTB4R2Q9NPC1 389 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF302Q9NR11 478 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAN1C1Q9NR34 630 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 CHST12Q9NRB3 414 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 DIAPH3Q9NSV4 1193 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZDHHC7Q9NXF8 308 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 KANSL3Q9P2N6 904 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 TCEAL9Q9UHQ7 104 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 RCAN3Q9UKA8 241 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 ANGPTL2Q9UKU9 493 aa2.69□□□□□ -1.98
RNU4-53P-201ENST00000410828 PCDHA6Q9UN73 950 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms