RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 EPC1Q9H2F5 836 aa12.03□□□□□ -0.48
CCDC148-203ENST00000409889 WDR6Q9NNW5 1121 aaKnown RBP12.03□□□□□ -0.48
CCDC148-203ENST00000409889 MAN1C1Q9NR34 630 aa12.03□□□□□ -0.48
CCDC148-203ENST00000409889 SPATA6Q9NWH7 488 aaPredicted RBP12.03□□□□□ -0.48
CCDC148-203ENST00000409889 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
CCDC148-203ENST00000409889 NFASCO94856 1347 aa12.03□□□□□ -0.48
CCDC148-203ENST00000409889 WDR81Q562E7 1941 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 SPDYE3A6NKU9 549 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 BACH1O14867 736 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 C22orf31O95567 290 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 SDSP20132 328 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 CSTF1Q05048 431 aaKnown RBP12.02□□□□□ -0.49
CCDC148-203ENST00000409889 TROAPQ12815 778 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 WTAPQ15007 396 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 UBE2SQ16763 222 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 FAM160B1Q5W0V3 765 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
CCDC148-203ENST00000409889 CCDC60Q8IWA6 550 aaPredicted RBP12.02□□□□□ -0.49
CCDC148-203ENST00000409889 RRP36Q96EU6 259 aaKnown RBP12.02□□□□□ -0.49
CCDC148-203ENST00000409889 KLHL5Q96PQ7 755 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 DSCC1Q9BVC3 393 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 VN1R3Q9BXE9 311 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 BCO2Q9BYV7 579 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 SLC2A4RGQ9NR83 387 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 SEC63Q9UGP8 760 aaKnown RBP12.02□□□□□ -0.49
CCDC148-203ENST00000409889 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
CCDC148-203ENST00000409889 MTCL1Q9Y4B5 1905 aaKnown RBP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 FASNP49327 2511 aaKnown RBP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 IGKV6D-21A0A0A0MT36 114 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 CCDC195A0A1B0GUA6 201 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 CARNS1A5YM72 827 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 ATG7O95352 703 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 CNPP09543 421 aaKnown RBP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 TGM1P22735 817 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 CLCN3P51790 818 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 NLRP11P59045 1033 aaKnown RBP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 STARD6P59095 220 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 DMWDQ09019 674 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 ITGB3BPQ13352 177 aaPredicted RBP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 COL9A3Q14050 684 aaPredicted RBP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 ZBTB44Q8NCP5 570 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 CMASQ8NFW8 434 aaPredicted RBP12.01□□□□□ -0.49
CCDC148-203ENST00000409889 SHDQ96IW2 340 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 MXRA8Q9BRK3 442 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 SPZ1Q9BXG8 430 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 PARD6AQ9NPB6 346 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 AKT3Q9Y243 479 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 ZFYVE26Q68DK2 2539 aa12.01□□□□□ -0.49
CCDC148-203ENST00000409889 KANSL1LA0AUZ9 987 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 ERICH2A1L162 156 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 DDX39AO00148 427 aaKnown RBP12□□□□□ -0.49
CCDC148-203ENST00000409889 IFIT3O14879 490 aaKnown RBP12□□□□□ -0.49
CCDC148-203ENST00000409889 INPPL1O15357 1258 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 GALTP07902 379 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 EIF4BP23588 611 aaKnown RBP12□□□□□ -0.49
CCDC148-203ENST00000409889 KIF5BP33176 963 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 HTR4Q13639 388 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 PDXDC2PQ6P474 469 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 ABHD15Q6UXT9 468 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
CCDC148-203ENST00000409889 ST13P5Q8NFI4 369 aaPredicted RBP12□□□□□ -0.49
CCDC148-203ENST00000409889 NRDE2Q9H7Z3 1164 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 ZNF302Q9NR11 478 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 TBC1D13Q9NVG8 400 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 ZSCAN32Q9NX65 697 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 DACT1Q9NYF0 836 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 GMEB2Q9UKD1 530 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 PCDHA6Q9UN73 950 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 PCDHA8Q9Y5H6 950 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 NUMBLQ9Y6R0 609 aa12□□□□□ -0.49
CCDC148-203ENST00000409889 RALGAPA1Q6GYQ0 2036 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 SLC30A4O14863 429 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 LILRB5O75023 590 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 RFPL2O75678 378 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 CCNE2O96020 404 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 LAMP2P13473 410 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 ATP4AP20648 1035 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 FGFR4P22455 802 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 RNASELQ05823 741 aaKnown RBP11.99□□□□□ -0.49
CCDC148-203ENST00000409889 TRDNQ13061 729 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 SNW1Q13573 536 aaKnown RBP11.99□□□□□ -0.49
CCDC148-203ENST00000409889 UBXN2BQ14CS0 331 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 ACAP1Q15027 740 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 CYP26C1Q6V0L0 522 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 TRMT1LQ7Z2T5 733 aaKnown RBP11.99□□□□□ -0.49
CCDC148-203ENST00000409889 CATIPQ7Z7H3 387 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 CKAP2LQ8IYA6 745 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 NETO1Q8TDF5 533 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
CCDC148-203ENST00000409889 RSPH1Q8WYR4 309 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 SMG7Q92540 1137 aaKnown RBP11.99□□□□□ -0.49
CCDC148-203ENST00000409889 LPPQ93052 612 aa11.99□□□□□ -0.49
CCDC148-203ENST00000409889 ZNF668Q96K58 619 aaPredicted RBP11.99□□□□□ -0.49
CCDC148-203ENST00000409889 MAP7D2Q96T17 732 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms