RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 PCDHB13Q9Y5F0 798 aa16.86■□□□□ 0.29
AP1S3-204ENST00000409375 TRIP12Q14669 1992 aaPredicted RBP16.86■□□□□ 0.29
AP1S3-204ENST00000409375 HTTP42858 3142 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 K7ENM7 598 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 CAND2O75155 1236 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 GLRA2P23416 452 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 CDK7P50613 346 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 EFNA5P52803 228 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 NLRP12P59046 1061 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 EHHADHQ08426 723 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 LAMTOR4Q0VGL1 99 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 MORC3Q14149 939 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 SLC39A5Q6ZMH5 540 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 RPAINQ86UA6 219 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 KIAA0319LQ8IZA0 1049 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 MLKLQ8NB16 471 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 PPP1R13LQ8WUF5 828 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 PAWRQ96IZ0 340 aaKnown RBP16.85■□□□□ 0.29
AP1S3-204ENST00000409375 NTPCRQ9BSD7 190 aaKnown RBP16.85■□□□□ 0.29
AP1S3-204ENST00000409375 FUCA2Q9BTY2 467 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 INO80BQ9C086 356 aaPredicted RBP16.85■□□□□ 0.29
AP1S3-204ENST00000409375 GZF1Q9H116 711 aaPredicted RBP16.85■□□□□ 0.29
AP1S3-204ENST00000409375 UBE4BO95155 1302 aa16.85■□□□□ 0.29
AP1S3-204ENST00000409375 EIF3DO15371 548 aaKnown RBP eCLIP16.84■□□□□ 0.29
AP1S3-204ENST00000409375 GCNT3O95395 438 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 NPTX2P47972 431 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 MNX1P50219 401 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-204ENST00000409375 NCKAP1LP55160 1127 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 SOX10P56693 466 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 ZNF445P59923 1031 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 ZNF200P98182 395 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-204ENST00000409375 MKRN4PQ13434 485 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-204ENST00000409375 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-204ENST00000409375 RNF149Q8NC42 400 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 DNAJB3Q8WWF6 145 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 NLRP7Q8WX94 980 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 NLRP4Q96MN2 994 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 TOX2Q96NM4 488 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
AP1S3-204ENST00000409375 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 POLD4Q9HCU8 107 aa16.84■□□□□ 0.29
AP1S3-204ENST00000409375 CAVIN2O95810 425 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 VTNP04004 478 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 SRGAP2CP0DJJ0 459 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 ATN1P54259 1190 aaPredicted RBP16.83■□□□□ 0.28
AP1S3-204ENST00000409375 TYRO3Q06418 890 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 STRN3Q13033 797 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 DRP2Q13474 957 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 BFSP2Q13515 415 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 CAPSQ13938 189 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 HIC1Q14526 733 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 SNX17Q15036 470 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 COBLL1Q53SF7 1204 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 ISM2Q6H9L7 571 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 RUFY4Q6ZNE9 571 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 ZNF720Q7Z2F6 126 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 HAUS6Q7Z4H7 955 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 ASAP3Q8TDY4 903 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 NFKBIZQ9BYH8 718 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 GCOM2Q9BZD3 368 aaPredicted RBP16.83■□□□□ 0.28
AP1S3-204ENST00000409375 SLC39A2Q9NP94 309 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 TRMT13Q9NUP7 481 aaKnown RBP16.83■□□□□ 0.28
AP1S3-204ENST00000409375 TBC1D7Q9P0N9 293 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 EXOC7Q9UPT5 735 aa16.83■□□□□ 0.28
AP1S3-204ENST00000409375 PSMA7O14818 248 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 SLC16A4O15374 487 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 B4GALT4O60513 344 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 GPC3P51654 580 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 NLRP11P59045 1033 aaKnown RBP16.82■□□□□ 0.28
AP1S3-204ENST00000409375 MRPS6P82932 125 aaKnown RBP16.82■□□□□ 0.28
AP1S3-204ENST00000409375 STK4Q13043 487 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.28
AP1S3-204ENST00000409375 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
AP1S3-204ENST00000409375 ANKRD33Q7Z3H0 272 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 SRGAP1Q7Z6B7 1085 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 MYOCDQ8IZQ8 938 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 GUF1Q8N442 669 aaKnown RBP16.82■□□□□ 0.28
AP1S3-204ENST00000409375 DIS3LQ8TF46 1054 aaKnown RBP16.82■□□□□ 0.28
AP1S3-204ENST00000409375 BSNDQ8WZ55 320 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 KCNN1Q92952 543 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 ZBTB10Q96DT7 871 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 TMEM206Q9H813 350 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 ARHGAP28Q9P2N2 729 aa16.82■□□□□ 0.28
AP1S3-204ENST00000409375 DENND3A2RUS2 1198 aa16.81■□□□□ 0.28
AP1S3-204ENST00000409375 K7ERI5 159 aa16.81■□□□□ 0.28
AP1S3-204ENST00000409375 PQBP1O60828 265 aaKnown RBP16.81■□□□□ 0.28
AP1S3-204ENST00000409375 NMT1P30419 496 aaKnown RBP16.81■□□□□ 0.28
AP1S3-204ENST00000409375 THPOP40225 353 aa16.81■□□□□ 0.28
AP1S3-204ENST00000409375 CRYBB1P53674 252 aaPredicted RBP16.81■□□□□ 0.28
AP1S3-204ENST00000409375 PTENP60484 403 aa16.81■□□□□ 0.28
AP1S3-204ENST00000409375 GTF2BQ00403 316 aa16.81■□□□□ 0.28
AP1S3-204ENST00000409375 NCBP1Q09161 790 aaKnown RBP16.81■□□□□ 0.28
AP1S3-204ENST00000409375 COL13A1Q5TAT6 717 aaPredicted RBP16.81■□□□□ 0.28
AP1S3-204ENST00000409375 CDCA2Q69YH5 1023 aaPredicted RBP16.81■□□□□ 0.28
AP1S3-204ENST00000409375 LRSAM1Q6UWE0 723 aa16.81■□□□□ 0.28
AP1S3-204ENST00000409375 IFNLR1Q8IU57 520 aaPredicted RBP16.81■□□□□ 0.28
AP1S3-204ENST00000409375 KIAA0895Q8NCT3 520 aa16.81■□□□□ 0.28
AP1S3-204ENST00000409375 ABHD8Q96I13 439 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms