RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 LACRTQ9GZZ8 138 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 SRRM3A6NNA2 597 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 KRT17Q04695 432 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 TBC1D9BQ66K14 1250 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 ARHGAP27Q6ZUM4 889 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 DEPTORQ8TB45 409 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 MEIS1O00470 390 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 MYCLP12524 364 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 PIK3CAP42336 1068 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 DDB1Q16531 1140 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 IZUMO3Q5VZ72 239 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 DARS2Q6PI48 645 aaKnown RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 RFX8Q6ZV50 586 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 TRIM50Q86XT4 487 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 TTC13Q8NBP0 860 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 AENQ8WTP8 325 aaKnown RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 WDR17Q8IZU2 1322 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 PYGBP11216 843 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 DYNLT1P63172 113 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 ALCAMQ13740 583 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 CDKAL1Q5VV42 579 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 NSMFQ6X4W1 530 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 PDZD4Q76G19 769 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 MFN1Q8IWA4 741 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 HEMGNQ9BXL5 484 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 TRPC5Q9UL62 973 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 CYP2D7A0A087X1C5 515 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 NOP56O00567 594 aaKnown RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 ECE1P42892 770 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 DPP8Q6V1X1 898 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 FRMD5Q7Z6J6 570 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 IGDCC4Q8TDY8 1250 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 ALKBH8Q96BT7 664 aaKnown RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 MTBPQ96DY7 904 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 WDR11Q9BZH6 1224 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 PXDNLA1KZ92 1463 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 ASAP2O43150 1006 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 AP1B1Q10567 949 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 ATL2Q8NHH9 583 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 COA7Q96BR5 231 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 CSRNP1Q96S65 589 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 C7orf25Q9BPX7 421 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 ETAA1Q9NY74 926 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 SUCLA2Q9P2R7 463 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-202ENST00000409031 CAPN6Q9Y6Q1 641 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 MADDQ8WXG6 1647 aa18.85■□□□□ 0.61
SMPD4-202ENST00000409031 POLR2MP0CAP2 368 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 MRPS9P82933 396 aaKnown RBP18.84■□□□□ 0.61
SMPD4-202ENST00000409031 CNGA3Q16281 694 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 BRDTQ58F21 947 aaPredicted RBP18.84■□□□□ 0.61
SMPD4-202ENST00000409031 OLFML2BQ68BL8 750 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 CHURC1Q8WUH1 139 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 THAP11Q96EK4 314 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 PHF20Q9BVI0 1012 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 FOXP3Q9BZS1 431 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 PCIF1Q9H4Z3 704 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 TBC1D23Q9NUY8 699 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 SERPINB12Q96P63 405 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 BAG5Q9UL15 447 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 AFG3L2Q9Y4W6 797 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.84■□□□□ 0.61
SMPD4-202ENST00000409031 ADCY10Q96PN6 1610 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 POTEMA6NI47 508 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 RIMBP2O15034 1052 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 UBTFL6P0CB48 400 aaPredicted RBP18.84■□□□□ 0.61
SMPD4-202ENST00000409031 SOX5P35711 763 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 TLK1Q9UKI8 766 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 EZH2Q15910 746 aaKnown RBP18.84■□□□□ 0.61
SMPD4-202ENST00000409031 RAPH1Q70E73 1250 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 BHMT2Q9H2M3 363 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 UBN1Q9NPG3 1134 aa18.84■□□□□ 0.61
SMPD4-202ENST00000409031 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
SMPD4-202ENST00000409031 UBOX5O94941 541 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 GALCP54803 685 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 BTNL9Q6UXG8 535 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 NLRX1Q86UT6 975 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 NUDCD3Q8IVD9 361 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 RIBC1Q8N443 379 aaPredicted RBP18.83■□□□□ 0.61
SMPD4-202ENST00000409031 NPHS2Q9NP85 383 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 IL1RAPL1Q9NZN1 696 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 G3BP2Q9UN86 482 aaKnown RBP18.83■□□□□ 0.61
SMPD4-202ENST00000409031 HSPA4LO95757 839 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 SYF2O95926 243 aaKnown RBP18.83■□□□□ 0.61
SMPD4-202ENST00000409031 USP17L2Q6R6M4 530 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 NUP85Q9BW27 656 aa18.83■□□□□ 0.61
SMPD4-202ENST00000409031 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 CRB1P82279 1406 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 HNRNPDLO14979 420 aaKnown RBP18.83■□□□□ 0.6
SMPD4-202ENST00000409031 HERVK_113P62684 666 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 NOP14P78316 857 aaKnown RBP18.83■□□□□ 0.6
SMPD4-202ENST00000409031 STK4Q13043 487 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 CFAP36Q96G28 342 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 MTO1Q9Y2Z2 717 aaKnown RBP18.83■□□□□ 0.6
SMPD4-202ENST00000409031 MRPL11Q9Y3B7 192 aaKnown RBP18.83■□□□□ 0.6
SMPD4-202ENST00000409031 DUSP10Q9Y6W6 482 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 SAT1P21673 171 aa18.83■□□□□ 0.6
SMPD4-202ENST00000409031 ZBED8Q8IZ13 594 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms