RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ZNF410Q86VK4 478 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 TPH2Q8IWU9 490 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 SLC7A3Q8WY07 619 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 TMEM143Q96AN5 459 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 JPH2Q9BR39 696 aaPredicted RBP21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 TMEM117Q9H0C3 514 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 IGFLR1Q9H665 355 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 DHX33Q9H6R0 707 aaKnown RBP21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 ZSWIM4Q9H7M6 989 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 A0A0U1RQF3 1178 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 NEMFO60524 1076 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 ATF7P17544 494 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 ATP2B1P20020 1258 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 POLGP54098 1239 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 DLX2Q07687 328 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 CLLU1OSQ5K130 101 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 ADGRD2Q7Z7M1 963 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 ZNF598Q86UK7 904 aaKnown RBP21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 COLGALT1Q8NBJ5 622 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 EIF2AK1Q9BQI3 630 aaKnown RBP21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 TTC12Q9H892 705 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 IFT122Q9HBG6 1241 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 CD320Q9NPF0 282 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 AAASQ9NRG9 546 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 COL4A3BPQ9Y5P4 624 aa21.57■■□□□ 1.04
SMARCB1-204ENST00000407422 GRXCR2A6NFK2 248 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 LINC01565O15544 149 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 TXKP42681 527 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 XKR9Q5GH70 373 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 PRPF31Q8WWY3 499 aaKnown RBP21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 MTMR9Q96QG7 549 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 HSD17B14Q9BPX1 270 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 LLPHQ9BRT6 129 aaKnown RBP21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 TMEM60Q9H2L4 133 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 DACT1Q9NYF0 836 aa21.56■■□□□ 1.04
SMARCB1-204ENST00000407422 HOXA2O43364 376 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 NCK2O43639 380 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 FGF18O76093 207 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 SFPQP23246 707 aaKnown RBP eCLIP21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 RFC5P40937 340 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 OTUD6AQ7L8S5 288 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 ABI1Q8IZP0 508 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 C8orf76Q96K31 380 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 CHST12Q9NRB3 414 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 PIN4Q9Y237 131 aaKnown RBP21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 SRGAP2CP0DJJ0 459 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 MCM7P33993 719 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 PBX3P40426 434 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 EMC2Q15006 297 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 SAFBQ15424 915 aaKnown RBP eCLIP21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 FAM178BQ8IXR5 827 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 THNSL1Q8IYQ7 743 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 HELQQ8TDG4 1101 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 INO80BQ9C086 356 aaPredicted RBP21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 PPME1Q9Y570 386 aa21.55■■□□□ 1.04
SMARCB1-204ENST00000407422 TBX10O75333 385 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 EOMESO95936 686 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 LAG3P18627 525 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 PHKA2P46019 1235 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 LAMTOR4Q0VGL1 99 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 CLUL1Q15846 466 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 LONRF3Q496Y0 759 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 TWF2Q6IBS0 349 aaKnown RBP21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 CATSPER4Q7RTX7 472 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 RBM23Q86U06 439 aaKnown RBP21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 LRRC43Q8N309 656 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 PSPC1Q8WXF1 523 aaKnown RBP21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 KHSRPQ92945 711 aaKnown RBP eCLIP21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 ZSCAN31Q96LW9 406 aaPredicted RBP21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 MINDY3Q9H8M7 445 aa21.54■■□□□ 1.04
SMARCB1-204ENST00000407422 A0A087WWV3 80 aa21.53■■□□□ 1.04
SMARCB1-204ENST00000407422 POTEMA6NI47 508 aa21.53■■□□□ 1.04
SMARCB1-204ENST00000407422 ERVFC1P60507 584 aa21.53■■□□□ 1.04
SMARCB1-204ENST00000407422 ADAM15Q13444 863 aa21.53■■□□□ 1.04
SMARCB1-204ENST00000407422 EXOC8Q8IYI6 725 aa21.53■■□□□ 1.04
SMARCB1-204ENST00000407422 LPPQ93052 612 aa21.53■■□□□ 1.04
SMARCB1-204ENST00000407422 TRIOO75962 3097 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 NRIP1P48552 1158 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 RBM25P49756 843 aaKnown RBP21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 UBE3AQ05086 875 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 PUS10Q3MIT2 529 aaKnown RBP21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 KCNT2Q6UVM3 1135 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 FERMT3Q86UX7 667 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 FBXO18Q8NFZ0 1043 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 MICAL1Q8TDZ2 1067 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 TRAIPQ9BWF2 469 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 XPNPEP1Q9NQW7 623 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 TLR9Q9NR96 1032 aa21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 SH2B1Q9NRF2 756 aaPredicted RBP21.52■■□□□ 1.04
SMARCB1-204ENST00000407422 MEIS3P2A8K0S8 358 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 LYPLA2O95372 231 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 CSPP1Q1MSJ5 1256 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 PPP2R3CQ969Q6 453 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 MTRQ99707 1265 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 PER2O15055 1255 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 GAS2O43903 313 aaKnown RBP21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 HMGN5P82970 282 aaKnown RBP21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 ZNF174Q15697 407 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 EFHBQ8N7U6 833 aa21.51■■□□□ 1.03
SMARCB1-204ENST00000407422 RNF149Q8NC42 400 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms