RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ARHGEF16Q5VV41 709 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 ZNF662Q6ZS27 426 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 TOGARAM2Q6ZUX3 1019 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 ZNF467Q7Z7K2 595 aaPredicted RBP14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 DNERQ8NFT8 737 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 ZNF507Q8TCN5 953 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 NSUN6Q8TEA1 469 aaKnown RBP14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 CNOT6LQ96LI5 555 aaKnown RBP14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 PCMTD1Q96MG8 357 aaPredicted RBP14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 PNMA5Q96PV4 448 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 ERGIC2Q96RQ1 377 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 RMDN3Q96TC7 470 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 DUSP9Q99956 384 aaKnown RBP14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 NUCKS1Q9H1E3 243 aaKnown RBP14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 BLOC1S4Q9NUP1 217 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 OGFRQ9NZT2 677 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 CTAGE9A4FU28 777 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 SOWAHDA6NJG2 315 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 ASB14A6NK59 587 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 SLC37A4O43826 429 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 ATP2A2P16615 1042 aaKnown RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 TRIM21P19474 475 aaKnown RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 CST5P28325 142 aaPredicted RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 ALDH5A1P51649 535 aaPredicted RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 STK4Q13043 487 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 MAN2A1Q16706 1144 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 ANKRD40Q6AI12 368 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 CXCL17Q6UXB2 119 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 IRF2BP1Q8IU81 584 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 RPUSD2Q8IZ73 545 aaKnown RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 MYOCDQ8IZQ8 938 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 MSL3Q8N5Y2 521 aaKnown RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 FGD4Q96M96 766 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 CEP63Q96MT8 703 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 DNAJC7Q99615 494 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 HAUS4Q9H6D7 363 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 PXMP2Q9NR77 195 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 PCDHA11Q9Y5I1 949 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 MTCH2Q9Y6C9 303 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 PRRC2BQ5JSZ5 2229 aaKnown RBP14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 MUC6Q6W4X9 2439 aa14.19□□□□□ -0.14
SMARCB1-203ENST00000407082 GBF1Q92538 1859 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 PIEZO1Q92508 2521 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 ASTN1O14525 1302 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 TRIM49BA6NDI0 452 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 MYMKA6NI61 221 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 B4DLN1 442 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 ADCY6O43306 1168 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 ATP8B1O43520 1251 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 CYP3A4P08684 503 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 IDEP14735 1019 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 EIF2AK2P19525 551 aaKnown RBP14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 GJA9P57773 515 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 MAMDC4Q6UXC1 1216 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 RAD9BQ6WBX8 426 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 GPR161Q8N6U8 529 aaKnown RBP14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 TSC1Q92574 1164 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 DDX12PQ92771 950 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 KHSRPQ92945 711 aaKnown RBP eCLIP14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 UIMC1Q96RL1 719 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 IWS1Q96ST2 819 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 MPHOSPH6Q99547 160 aaKnown RBP14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 TSGA10Q9BZW7 698 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 TRPV6Q9H1D0 765 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 KCNMB3Q9NPA1 279 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 COG5Q9UP83 839 aa14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 EPN1Q9Y6I3 576 aaPredicted RBP14.18□□□□□ -0.14
SMARCB1-203ENST00000407082 LOC102724159A0A0B4J2E5 919 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 KRT86O43790 486 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 TLL1O43897 1013 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 CD4P01730 458 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 CA3P07451 260 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 MUTP22033 750 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 CIITAP33076 1130 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 ZNF76P36508 570 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 SREBF1P36956 1147 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 ARHGAP4P98171 946 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 FKBP3Q00688 224 aaKnown RBP14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 PPP2R3AQ06190 1150 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 BMS1Q14692 1282 aaKnown RBP14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 PWP2Q15269 919 aaKnown RBP14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 VWA3BQ502W6 1294 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 ARMCX2Q7L311 632 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 ARNTL2Q8WYA1 636 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 GOLGA1Q92805 767 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 HAS1Q92839 578 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 HLA-CQ95604 372 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 SCLYQ96I15 445 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 ABHD16BQ9H3Z7 469 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 SLC39A2Q9NP94 309 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 PANK4Q9NVE7 773 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 DNM3Q9UQ16 869 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 MRFAP1Q9Y605 127 aa14.17□□□□□ -0.14
SMARCB1-203ENST00000407082 TTC26A0AVF1 554 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 POTEMA6NI47 508 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 GPR37L1O60883 481 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 NDUFA10O95299 355 aa14.16□□□□□ -0.14
SMARCB1-203ENST00000407082 KRT18P05783 430 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms