RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PPP2R5AQ15172 486 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 DHX40Q8IX18 779 aaKnown RBP22.57■■□□□ 1.2
CHKB-201ENST00000406938 DHTKD1Q96HY7 919 aaPredicted RBP22.57■■□□□ 1.2
CHKB-201ENST00000406938 MED15Q96RN5 788 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 KMT5AQ9NQR1 393 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 GTF2IRD1Q9UHL9 959 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 A0A1W2PQ45 241 aaPredicted RBP22.57■■□□□ 1.2
CHKB-201ENST00000406938 A0A1W2PQY0 241 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 PPP1R37O75864 691 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 PRPF6O94906 941 aaKnown RBP22.57■■□□□ 1.2
CHKB-201ENST00000406938 KIF20AO95235 890 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 TMOD1P28289 359 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 STX17P56962 302 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 ZNF200P98182 395 aaPredicted RBP22.57■■□□□ 1.2
CHKB-201ENST00000406938 LAMTOR4Q0VGL1 99 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 MXD4Q14582 209 aaPredicted RBP22.57■■□□□ 1.2
CHKB-201ENST00000406938 BMT2Q1RMZ1 405 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 STXBP4Q6ZWJ1 553 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 HAUS6Q7Z4H7 955 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 NELFCDQ8IXH7 590 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 SLC17A8Q8NDX2 589 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 TMEM161BQ8NDZ6 487 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 GLT1D1Q96MS3 346 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 NTPCRQ9BSD7 190 aaKnown RBP22.57■■□□□ 1.2
CHKB-201ENST00000406938 STRA6Q9BX79 667 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 ST6GALNAC4Q9H4F1 302 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 RWDD2AQ9UIY3 292 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 OGDHLQ9ULD0 1010 aa22.57■■□□□ 1.2
CHKB-201ENST00000406938 GRIN2DO15399 1336 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 FSD2A1L4K1 749 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 GOLGA6L3A6NEY3 463 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 LRRIQ4A6NIV6 560 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 DNM1LO00429 736 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 TREHO43280 583 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 GNAT1P11488 350 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 PMS1P54277 932 aaKnown RBP22.56■■□□□ 1.2
CHKB-201ENST00000406938 MYL5Q02045 173 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 ALCAMQ13740 583 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 FAM47CQ5HY64 1035 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 RHPN2Q8IUC4 686 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 KSR1Q8IVT5 923 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 VTI1AQ96AJ9 217 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 PHF24Q9UPV7 400 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 AKT3Q9Y243 479 aa22.56■■□□□ 1.2
CHKB-201ENST00000406938 UBE4BO95155 1302 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 TRIM49BA6NDI0 452 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 CYP2C9P11712 490 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 HOXD13P35453 343 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 KCNA1Q09470 495 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 ITGA7Q13683 1181 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 RUFY4Q6ZNE9 571 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 SESTD1Q86VW0 696 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 DEPTORQ8TB45 409 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 ZNF507Q8TCN5 953 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 P2RX5Q93086 422 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 MAP7D2Q96T17 732 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 ARHGAP28Q9P2N2 729 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 PCDHB13Q9Y5F0 798 aa22.55■■□□□ 1.2
CHKB-201ENST00000406938 BECN2A8MW95 431 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 IKBKBO14920 756 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 CCNE1P24864 410 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 GDF6Q6KF10 455 aaPredicted RBP22.54■■□□□ 1.2
CHKB-201ENST00000406938 KIAA0319LQ8IZA0 1049 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 NLRP4Q96MN2 994 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 FAM49AQ9H0Q0 323 aaPredicted RBP22.54■■□□□ 1.2
CHKB-201ENST00000406938 SEMA6BQ9H3T3 888 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 PRDM10Q9NQV6 1147 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 KCNG1Q9UIX4 513 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 ZMYM2Q9UBW7 1377 aa22.54■■□□□ 1.2
CHKB-201ENST00000406938 SMIM35A0A1B0GVV1 85 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 DENND3A2RUS2 1198 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 VTNP04004 478 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 GTF2BQ00403 316 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 NCAPHQ15003 741 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 KNOP1Q1ED39 458 aaKnown RBP22.53■■□□□ 1.2
CHKB-201ENST00000406938 CENPPQ6IPU0 288 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 RNF149Q8NC42 400 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 ENOX1Q8TC92 643 aaKnown RBP22.53■■□□□ 1.2
CHKB-201ENST00000406938 U2AF1L4Q8WU68 220 aaKnown RBP22.53■■□□□ 1.2
CHKB-201ENST00000406938 KCTD10Q9H3F6 313 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 STARD7Q9NQZ5 370 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 KAT6AQ92794 2004 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 BICDL2A1A5D9 508 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 H0YCG3 227 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 SRGAP2CP0DJJ0 459 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 TFDP1Q14186 410 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 TTI2Q6NXR4 508 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 ZNF668Q96K58 619 aaPredicted RBP22.53■■□□□ 1.2
CHKB-201ENST00000406938 PPP1R16BQ96T49 567 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 CRISPLD2Q9H0B8 497 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 NFE2L3Q9Y4A8 694 aa22.53■■□□□ 1.2
CHKB-201ENST00000406938 SMTNL1A8MU46 457 aa22.52■■□□□ 1.2
CHKB-201ENST00000406938 ASAP2O43150 1006 aa22.52■■□□□ 1.2
CHKB-201ENST00000406938 ZCWPW2Q504Y3 356 aa22.52■■□□□ 1.2
CHKB-201ENST00000406938 CDCA2Q69YH5 1023 aaPredicted RBP22.52■■□□□ 1.2
CHKB-201ENST00000406938 ANKRD40Q6AI12 368 aa22.52■■□□□ 1.2
CHKB-201ENST00000406938 HVCN1Q96D96 273 aa22.52■■□□□ 1.2
CHKB-201ENST00000406938 TBX20Q9UMR3 447 aa22.52■■□□□ 1.2
CHKB-201ENST00000406938 A0A0U1RQG5 324 aaPredicted RBP22.51■■□□□ 1.19
CHKB-201ENST00000406938 GOLGA6L19H0YKK7 550 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms