RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 C17orf75Q9HAS0 396 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 KMT5AQ9NQR1 393 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 BZW2Q9Y6E2 419 aaKnown RBP26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 SOWAHBA6NEL2 793 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 TISP43B9A030 160 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 PJA2O43164 708 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 TACC1O75410 805 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 CNMDO75829 334 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 DGAT1O75907 488 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 SLC25A27O95847 323 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 TRIM49P0CI25 452 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 TRIM49CP0CI26 452 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 EAPPQ56P03 285 aaPredicted RBP26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 XKR3Q5GH77 459 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 TEX35Q5T0J7 233 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 INTS8Q75QN2 995 aaKnown RBP26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 FASTKD5Q7L8L6 764 aaKnown RBP26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 XXYLT1Q8NBI6 393 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 TMEM161BQ8NDZ6 487 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 SPIRE2Q8WWL2 714 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 OPTNQ96CV9 577 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 CYP26B1Q9NR63 512 aa26.92■■□□□ 1.9
DNMT3A-206ENST00000406659 OSBPP22059 807 aa26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 CHMP4BP1P59074 171 aa26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 AMPD2Q01433 879 aa26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 MYL7Q01449 175 aa26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 RSRC2Q7L4I2 434 aaKnown RBP26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 CBWD1Q9BRT8 395 aa26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 HSPBP1Q9NZL4 362 aa26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 PUF60Q9UHX1 559 aaKnown RBP26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 TBX20Q9UMR3 447 aa26.91■■□□□ 1.9
DNMT3A-206ENST00000406659 IRF2BP2Q7Z5L9 587 aa26.9■■□□□ 1.9
DNMT3A-206ENST00000406659 TRIM58Q8NG06 486 aa26.9■■□□□ 1.9
DNMT3A-206ENST00000406659 ATP6V0A4Q9HBG4 840 aa26.9■■□□□ 1.9
DNMT3A-206ENST00000406659 ZNF302Q9NR11 478 aa26.9■■□□□ 1.9
DNMT3A-206ENST00000406659 IGSF9BQ9UPX0 1349 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 ENC1O14682 589 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 ATG7O95352 703 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 ATP1A1P05023 1023 aaKnown RBP26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 EDNRBP24530 442 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 COPB2P35606 906 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 SLC18A3Q16572 532 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 IQCEQ6IPM2 695 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 TRAPPC11Q7Z392 1133 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 NTPCRQ9BSD7 190 aaKnown RBP26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 PDLIM7Q9NR12 457 aa26.89■■□□□ 1.9
DNMT3A-206ENST00000406659 ANO9A1A5B4 782 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 DENND3A2RUS2 1198 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 GLTPD2A6NH11 291 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 VAMP7P51809 220 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 CBWD6Q4V339 395 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 CBWD3Q5JTY5 395 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 CBWD5Q5RIA9 395 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 PAPD7Q5XG87 772 aaKnown RBP26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 FBXO38Q6PIJ6 1188 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 BSNDQ8WZ55 320 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 INTS2Q9H0H0 1204 aaKnown RBP26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 MLXIPQ9HAP2 919 aa26.89■■□□□ 1.89
DNMT3A-206ENST00000406659 SYNGAP1Q96PV0 1343 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 MAPK13O15264 365 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 SOX10P56693 466 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 JAM2P57087 298 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 MTERF2Q49AM1 385 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 GJB7Q6PEY0 223 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 MAP4K3Q8IVH8 894 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 GPR161Q8N6U8 529 aaKnown RBP26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 RABGGTAQ92696 567 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 IFT74Q96LB3 600 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 MPHOSPH6Q99547 160 aaKnown RBP26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 SAR1BQ9Y6B6 198 aa26.88■■□□□ 1.89
DNMT3A-206ENST00000406659 ARID2Q68CP9 1835 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 N4BP1O75113 896 aaKnown RBP26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 MOCS3O95396 460 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 RTP1P59025 263 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 TUBB4BP68371 445 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 MOGSQ13724 837 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 ALS2CR12Q96Q35 445 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 KIFC3Q9BVG8 833 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 TAF1DQ9H5J8 278 aaPredicted RBP26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 HDAC6Q9UBN7 1215 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 ADAMTS1Q9UHI8 967 aa26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 AJAP1Q9UKB5 411 aaPredicted RBP26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 MAFBQ9Y5Q3 323 aaPredicted RBP26.87■■□□□ 1.89
DNMT3A-206ENST00000406659 A0A087X0T9 212 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 FAM228BP0C875 321 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 UBA1P22314 1058 aaKnown RBP26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 PRKCIP41743 596 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 STAT1P42224 750 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 PTK2Q05397 1052 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 XPNPEP1Q9NQW7 623 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 RBPJLQ9UBG7 517 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 DAAM1Q9Y4D1 1078 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 MYH9P35579 1960 aaKnown RBP26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 OATP04181 439 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 H2AFXP16104 143 aaPredicted RBP26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 FERP16591 822 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 CETN1Q12798 172 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 NEDD9Q14511 834 aa26.86■■□□□ 1.89
DNMT3A-206ENST00000406659 POLR3FQ9H1D9 316 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms