RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 IFNLR1Q8IU57 520 aaPredicted RBP17.65■□□□□ 0.42
GDPD3-202ENST00000406256 SYT2Q8N9I0 419 aaPredicted RBP17.65■□□□□ 0.42
GDPD3-202ENST00000406256 MCPH1Q8NEM0 835 aa17.65■□□□□ 0.42
GDPD3-202ENST00000406256 NLRP7Q8WX94 980 aa17.65■□□□□ 0.42
GDPD3-202ENST00000406256 NLRP4Q96MN2 994 aa17.65■□□□□ 0.42
GDPD3-202ENST00000406256 CCDC43Q96MW1 224 aaKnown RBP17.65■□□□□ 0.42
GDPD3-202ENST00000406256 SLC9A7Q96T83 725 aa17.65■□□□□ 0.42
GDPD3-202ENST00000406256 PBX4Q9BYU1 374 aa17.65■□□□□ 0.42
GDPD3-202ENST00000406256 POLR3FQ9H1D9 316 aaPredicted RBP17.65■□□□□ 0.42
GDPD3-202ENST00000406256 TSPYL2Q9H2G4 693 aaPredicted RBP17.65■□□□□ 0.42
GDPD3-202ENST00000406256 PCDHA7Q9UN72 937 aa17.65■□□□□ 0.42
GDPD3-202ENST00000406256 REV3LO60673 3130 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.64■□□□□ 0.41
GDPD3-202ENST00000406256 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.64■□□□□ 0.41
GDPD3-202ENST00000406256 ENPP3O14638 875 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 EFCAB14O75071 495 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 CDC42EP1Q00587 391 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 ARSHQ5FYA8 562 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 MAEAQ7L5Y9 396 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 PHOSPHO2Q8TCD6 241 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 MTIF3Q9H2K0 278 aaKnown RBP17.64■□□□□ 0.41
GDPD3-202ENST00000406256 YBX2Q9Y2T7 364 aaKnown RBP17.64■□□□□ 0.41
GDPD3-202ENST00000406256 NLRC5Q86WI3 1866 aa17.64■□□□□ 0.41
GDPD3-202ENST00000406256 ASAP2O43150 1006 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 CUTAO60888 179 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 ARHGEF15O94989 841 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 PLA2G4BP0C869 781 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 SRGAP2CP0DJJ0 459 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
GDPD3-202ENST00000406256 RABGGTBP53611 331 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 PTENP60484 403 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 POU5F1BQ06416 359 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 NFX1Q12986 1120 aaKnown RBP17.63■□□□□ 0.41
GDPD3-202ENST00000406256 MXD4Q14582 209 aaPredicted RBP17.63■□□□□ 0.41
GDPD3-202ENST00000406256 HERC6Q8IVU3 1022 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 RNF149Q8NC42 400 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 KCNG4Q8TDN1 519 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 LEO1Q8WVC0 666 aaPredicted RBP17.63■□□□□ 0.41
GDPD3-202ENST00000406256 RAD54LQ92698 747 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 GCOM2Q9BZD3 368 aaPredicted RBP17.63■□□□□ 0.41
GDPD3-202ENST00000406256 RC3H2Q9HBD1 1191 aaKnown RBP17.63■□□□□ 0.41
GDPD3-202ENST00000406256 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
GDPD3-202ENST00000406256 COL6A3P12111 3177 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 ADGRA3Q8IWK6 1321 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 GJB5O95377 273 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 MYOGP15173 224 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 GUCY2CP25092 1073 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 NUCB2P80303 420 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 MCM6Q14566 821 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 E2F4Q16254 413 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 AMHR2Q16671 573 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 FAM102BQ5T8I3 360 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 CDCA2Q69YH5 1023 aaPredicted RBP17.62■□□□□ 0.41
GDPD3-202ENST00000406256 TOP1MTQ969P6 601 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 CDK5RAP3Q96JB5 506 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 FTHL17Q9BXU8 183 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 NFKBIZQ9BYH8 718 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 CFAP45Q9UL16 551 aa17.62■□□□□ 0.41
GDPD3-202ENST00000406256 GPR182O15218 404 aa17.61■□□□□ 0.41
GDPD3-202ENST00000406256 HIP1RO75146 1068 aa17.61■□□□□ 0.41
GDPD3-202ENST00000406256 EDN1P05305 212 aa17.61■□□□□ 0.41
GDPD3-202ENST00000406256 KCNJ6P48051 423 aa17.61■□□□□ 0.41
GDPD3-202ENST00000406256 MBTD1Q05BQ5 628 aa17.61■□□□□ 0.41
GDPD3-202ENST00000406256 SRGAP1Q7Z6B7 1085 aa17.61■□□□□ 0.41
GDPD3-202ENST00000406256 SCLT1Q96NL6 688 aa17.61■□□□□ 0.41
GDPD3-202ENST00000406256 NPHP3-ACAD11A0A0J9YXS1 232 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 LCHNA4D1U4 455 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 C9IYK1 514 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 DNAJB2P25686 324 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 HOXA11P31270 313 aaPredicted RBP17.6■□□□□ 0.41
GDPD3-202ENST00000406256 ANP32AP39687 249 aaKnown RBP17.6■□□□□ 0.41
GDPD3-202ENST00000406256 KRT85P78386 507 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 HTRA4P83105 476 aaPredicted RBP17.6■□□□□ 0.41
GDPD3-202ENST00000406256 RESP18Q5W5W9 173 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 MYOCDQ8IZQ8 938 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 LARP4BQ92615 738 aaKnown RBP17.6■□□□□ 0.41
GDPD3-202ENST00000406256 ADAM2Q99965 735 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 CCDC113Q9H0I3 377 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 RGS18Q9NS28 235 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 STK17AQ9UEE5 414 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 RALGAPA2Q2PPJ7 1873 aa17.6■□□□□ 0.41
GDPD3-202ENST00000406256 AMHP03971 560 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 FAM189BP81408 668 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 SPRED2Q7Z698 418 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 KIFAP3Q92845 792 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 KIFC3Q9BVG8 833 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 TTYH1Q9H313 450 aaPredicted RBP17.59■□□□□ 0.41
GDPD3-202ENST00000406256 AGPAT5Q9NUQ2 364 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 CIZ1Q9ULV3 898 aaPredicted RBP17.59■□□□□ 0.41
GDPD3-202ENST00000406256 RBM19Q9Y4C8 960 aaKnown RBP17.59■□□□□ 0.41
GDPD3-202ENST00000406256 PCDHA11Q9Y5I1 949 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 PRUNE2Q8WUY3 3088 aa17.59■□□□□ 0.41
GDPD3-202ENST00000406256 ATG2AQ2TAZ0 1938 aa17.58■□□□□ 0.41
GDPD3-202ENST00000406256 TRIP11Q15643 1979 aa17.58■□□□□ 0.41
GDPD3-202ENST00000406256 TTLL13PA6NNM8 815 aa17.58■□□□□ 0.4
GDPD3-202ENST00000406256 TSPAN1O60635 241 aa17.58■□□□□ 0.4
GDPD3-202ENST00000406256 SSBP05455 408 aaKnown RBP eCLIP17.58■□□□□ 0.4
GDPD3-202ENST00000406256 ATF7P17544 494 aaPredicted RBP17.58■□□□□ 0.4
GDPD3-202ENST00000406256 SFPQP23246 707 aaKnown RBP eCLIP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms