RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 LRCH2Q5VUJ6 765 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 TMEM87AQ8NBN3 555 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 HELQQ8TDG4 1101 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 LENG9Q96B70 501 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 ASIC4Q96FT7 647 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 ZNF668Q96K58 619 aaPredicted RBP13.9□□□□□ -0.18
PRAME-204ENST00000403441 TEKT3Q9BXF9 490 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
PRAME-204ENST00000403441 IRF2BPLQ9H1B7 796 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 KMT2EQ8IZD2 1858 aa13.9□□□□□ -0.18
PRAME-204ENST00000403441 CARNS1A5YM72 827 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 MSH4O15457 936 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 DNM2P50570 870 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 CDC42EP1Q00587 391 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 MTMR3Q13615 1198 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 UGCGQ16739 394 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 MRPL43Q8N983 215 aaKnown RBP13.89□□□□□ -0.19
PRAME-204ENST00000403441 PHKBQ93100 1093 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 TMEM169Q96HH4 297 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 PHOX2BQ99453 314 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 SLC26A6Q9BXS9 759 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 GCOM2Q9BZD3 368 aaPredicted RBP13.89□□□□□ -0.19
PRAME-204ENST00000403441 PDRG1Q9NUG6 133 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 HCFC2Q9Y5Z7 792 aa13.89□□□□□ -0.19
PRAME-204ENST00000403441 CACNA1HO95180 2353 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 C2orf71A6NGG8 1288 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 FGFR4P22455 802 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 SFPQP23246 707 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRAME-204ENST00000403441 USP11P51784 963 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 VCPP55072 806 aaKnown RBP13.88□□□□□ -0.19
PRAME-204ENST00000403441 BCAR1P56945 870 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 TCF15Q12870 199 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 ZNF598Q86UK7 904 aaKnown RBP13.88□□□□□ -0.19
PRAME-204ENST00000403441 UBALD2Q8IYN6 164 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 KREMEN2Q8NCW0 462 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 RDM1Q8NG50 284 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 RIPOR3Q96MK2 946 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 ADAM7Q9H2U9 754 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 UNC45AQ9H3U1 944 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
PRAME-204ENST00000403441 CHST12Q9NRB3 414 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 DZANK1Q9NVP4 752 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 VPS54Q9P1Q0 977 aa13.88□□□□□ -0.19
PRAME-204ENST00000403441 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
PRAME-204ENST00000403441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
PRAME-204ENST00000403441 ST18O60284 1047 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 CLASP2O75122 1294 aaKnown RBP13.87□□□□□ -0.19
PRAME-204ENST00000403441 ZC3H11AO75152 810 aaKnown RBP eCLIP13.87□□□□□ -0.195e-69■□□□□ 8.2
PRAME-204ENST00000403441 SKIP12755 728 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 AVPR2P30518 371 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 MTHFRP42898 656 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 NUBP1P53384 320 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 NLRP5P59047 1200 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 TWF2Q6IBS0 349 aaKnown RBP13.87□□□□□ -0.19
PRAME-204ENST00000403441 GLB1LQ6UWU2 654 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 MIER3Q7Z3K6 550 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 TRIM22Q8IYM9 498 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 KIF2CQ99661 725 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 SH3GLB2Q9NR46 395 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 TPCN1Q9ULQ1 816 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 SORCS3Q9UPU3 1222 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 WDR81Q562E7 1941 aa13.87□□□□□ -0.19
PRAME-204ENST00000403441 PFKFB2O60825 505 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 CXCL14O95715 111 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 PHKA2P46019 1235 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 RAB27AP51159 221 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 POLGP54098 1239 aaPredicted RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 AK2P54819 239 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 RNASELQ05823 741 aaKnown RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 GIT2Q14161 759 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 TARBP2Q15633 366 aaKnown RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 MTERF2Q49AM1 385 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 FAM177A1Q8N128 213 aaPredicted RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 TDRD5Q8NAT2 981 aaKnown RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 NIFKQ9BYG3 293 aaKnown RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 INO80BQ9C086 356 aaPredicted RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
PRAME-204ENST00000403441 PIN4Q9Y237 131 aaKnown RBP13.86□□□□□ -0.19
PRAME-204ENST00000403441 C2CD4DB7Z1M9 353 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 NT5C1B-RDH14C9J2C7 533 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 GFRA3O60609 400 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 CSDE1O75534 798 aaKnown RBP13.85□□□□□ -0.19
PRAME-204ENST00000403441 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
PRAME-204ENST00000403441 CCT2P78371 535 aaKnown RBP13.85□□□□□ -0.19
PRAME-204ENST00000403441 SCRN1Q12765 414 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 DRP2Q13474 957 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 ANKRD1Q15327 319 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 Q4G0T1 1027 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
PRAME-204ENST00000403441 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
PRAME-204ENST00000403441 ATOH1Q92858 354 aaPredicted RBP13.85□□□□□ -0.19
PRAME-204ENST00000403441 JPH2Q9BR39 696 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms