RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AJAP1Q9UKB5 411 aaPredicted RBP21.54■■□□□ 1.04
CCDC47-202ENST00000403162 STK24Q9Y6E0 443 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 ASTN1O14525 1302 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 MPHOSPH10O00566 681 aaKnown RBP21.53■■□□□ 1.04
CCDC47-202ENST00000403162 DAPK3O43293 454 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 TRAPPC3O43617 180 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 NR3C1P04150 777 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PAEPP09466 180 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 SPATA31C1P0DKV0 1188 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 ITGA4P13612 1032 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PSMC6P62333 389 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 ACTN3Q08043 901 aaPredicted RBP21.53■■□□□ 1.04
CCDC47-202ENST00000403162 DNAAF5Q86Y56 855 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PLCD3Q8N3E9 789 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PPANQ9NQ55 473 aaKnown RBP21.53■■□□□ 1.04
CCDC47-202ENST00000403162 FAM114A2Q9NRY5 505 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 GCNT4Q9P109 453 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PGAP2Q9UHJ9 254 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 AMACRQ9UHK6 382 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 EPHX2P34913 555 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 FLT3P36888 993 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PPP2R2AP63151 447 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PABPC4Q13310 644 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC47-202ENST00000403162 CERKLQ49MI3 558 aaPredicted RBP21.53■■□□□ 1.04
CCDC47-202ENST00000403162 SPDYCQ5MJ68 293 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 MIGA2Q7L4E1 593 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 DAAM2Q86T65 1068 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 UBLCP1Q8WVY7 318 aaPredicted RBP21.53■■□□□ 1.04
CCDC47-202ENST00000403162 PCDHA1Q9Y5I3 950 aa21.53■■□□□ 1.04
CCDC47-202ENST00000403162 NCANO14594 1321 aa21.52■■□□□ 1.04
CCDC47-202ENST00000403162 Q4G0T1 1027 aa21.52■■□□□ 1.04
CCDC47-202ENST00000403162 CCDC17Q96LX7 622 aa21.52■■□□□ 1.04
CCDC47-202ENST00000403162 TEPSINQ96N21 525 aa21.52■■□□□ 1.04
CCDC47-202ENST00000403162 MNAT1P51948 309 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 ARHGAP4P98171 946 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 POU5F1Q01860 360 aaKnown RBP21.51■■□□□ 1.03
CCDC47-202ENST00000403162 IFT88Q13099 833 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 PTPROQ16827 1216 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 RNF187Q5TA31 235 aaPredicted RBP21.51■■□□□ 1.03
CCDC47-202ENST00000403162 TCERG1LQ5VWI1 586 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 TATDN1Q6P1N9 297 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 SLC30A5Q8TAD4 765 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 OLIG1Q8TAK6 271 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 UTP11Q9Y3A2 253 aaKnown RBP21.51■■□□□ 1.03
CCDC47-202ENST00000403162 MEIS2O14770 477 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 TTI1O43156 1089 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 U2AF1L4Q8WU68 220 aaKnown RBP21.51■■□□□ 1.03
CCDC47-202ENST00000403162 AMFRQ9UKV5 643 aa21.51■■□□□ 1.03
CCDC47-202ENST00000403162 DIS3Q9Y2L1 958 aaKnown RBP21.51■■□□□ 1.03
CCDC47-202ENST00000403162 C5orf60A6NFR6 353 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 MEIS1O00470 390 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 STAT1P42224 750 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 CASP4P49662 377 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 SMTNP53814 917 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 BORCS6Q96GS4 357 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 IQCA1LA6NCM1 817 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 F8VZ95 297 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 GDF11O95390 407 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 GALCP54803 685 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 SETQ01105 290 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-202ENST00000403162 PRR16Q569H4 304 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 USP50Q70EL3 339 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-202ENST00000403162 ARMC9Q7Z3E5 817 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 PROCA1Q8NCQ7 364 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-202ENST00000403162 LENG9Q96B70 501 aa21.5■■□□□ 1.03
CCDC47-202ENST00000403162 ACTR5Q9H9F9 607 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-202ENST00000403162 DDX20Q9UHI6 824 aaKnown RBP21.5■■□□□ 1.03
CCDC47-202ENST00000403162 TBC1D12O60347 775 aa21.49■■□□□ 1.03
CCDC47-202ENST00000403162 SHROOM1Q2M3G4 852 aaPredicted RBP21.49■■□□□ 1.03
CCDC47-202ENST00000403162 PRAMEF18Q5VWM3 479 aa21.49■■□□□ 1.03
CCDC47-202ENST00000403162 GJB7Q6PEY0 223 aa21.49■■□□□ 1.03
CCDC47-202ENST00000403162 CCDC13Q8IYE1 715 aa21.49■■□□□ 1.03
CCDC47-202ENST00000403162 LNX1Q8TBB1 728 aaPredicted RBP21.49■■□□□ 1.03
CCDC47-202ENST00000403162 RFFLQ8WZ73 363 aa21.49■■□□□ 1.03
CCDC47-202ENST00000403162 DCPSQ96C86 337 aaKnown RBP21.49■■□□□ 1.03
CCDC47-202ENST00000403162 FAM20AQ96MK3 541 aa21.49■■□□□ 1.03
CCDC47-202ENST00000403162 A1CFQ9NQ94 594 aaKnown RBP21.49■■□□□ 1.03
CCDC47-202ENST00000403162 OLFML3Q9NRN5 406 aa21.49■■□□□ 1.03
CCDC47-202ENST00000403162 CNOT8Q9UFF9 292 aaKnown RBP21.49■■□□□ 1.03
CCDC47-202ENST00000403162 NOVA2Q9UNW9 492 aaKnown RBP21.49■■□□□ 1.03
CCDC47-202ENST00000403162 EVI5O60447 810 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 PPFIA2O75334 1257 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 TMEM253P0C7T8 217 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 EIF3BP55884 814 aaKnown RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 PPP2R5EQ16537 467 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 NFIL3Q16649 462 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 ODF2Q5BJF6 829 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 NBPF12Q5TAG4 269 aaPredicted RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 CCDC121Q6ZUS5 278 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 CCDC91Q7Z6B0 441 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 DCAF4Q8WV16 495 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 TXLNGYQ9BZA5 131 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 BCCIPQ9P287 314 aaKnown RBP eCLIP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 RSPH10B2B2RC85 870 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 TBCAO75347 108 aaKnown RBP21.48■■□□□ 1.03
CCDC47-202ENST00000403162 RSPH10BP0C881 870 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 TMOD1P28289 359 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 SOX5P35711 763 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 PTENP60484 403 aa21.48■■□□□ 1.03
CCDC47-202ENST00000403162 PPATQ06203 517 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms