RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 SERPINI1Q99574 410 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 V9GYQ6 96 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 KRT6AP02538 564 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 KRT6BP04259 564 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 KRT6CP48668 564 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 HDAC4P56524 1084 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 BPIFB4P59827 614 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 GUCY2DQ02846 1103 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 BNIPLQ7Z465 357 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 CMTR1Q8N1G2 835 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 MARCH10Q8NA82 808 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 MEFVO15553 781 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 ANKS3Q6ZW76 656 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 CROCCP2Q86T23 111 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 STX12Q86Y82 276 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 OR6B3Q8NGW1 331 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 ARL8AQ96BM9 186 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 ULK4Q96C45 1275 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 E5RI56 91 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 ASMTLO95671 621 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 GYS1P13807 737 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 HSPA6P17066 643 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 SLC16A2P36021 539 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 TAS2R42Q7RTR8 314 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 SNRNP27Q8WVK2 155 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 MAN1C1Q9NR34 630 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 EIF2S3P41091 472 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 EXOSC4Q9NPD3 245 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 POLE3Q9NRF9 147 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 H2AFY2Q9P0M6 372 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 ARIH1Q9Y4X5 557 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 MT-ND3P03897 115 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 COMMD2Q86X83 199 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 CALN1Q9BXU9 219 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 PLEKHA5Q9HAU0 1116 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 TRIM39Q9HCM9 518 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 ZNF212Q9UDV6 495 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 TOP2BQ02880 1626 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 CCL15-CCL14A0A0B4J2E2 113 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 CCL15Q16663 113 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 TAF8Q7Z7C8 310 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 THNSL1Q8IYQ7 743 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 CCHCR1Q8TD31 782 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 TTC17Q96AE7 1141 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 FAF2Q96CS3 445 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 VPS54Q9P1Q0 977 aa11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-208ENST00000399601 DLGAP3O95886 979 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 CHRNA5P30532 468 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 PSMC6P62333 389 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 C10orf76Q5T2E6 689 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ARMC6Q6NXE6 501 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 CCDC103Q8IW40 242 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 TUBGCP2Q9BSJ2 902 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 KLHL25Q9H0H3 589 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 SPATA2Q9UM82 520 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 PCDHB7Q9Y5E2 793 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 CRKP46108 304 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 CHSY1Q86X52 802 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 IQCF2Q8IXL9 164 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 APPL2Q8NEU8 664 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 EXD1Q8NHP7 514 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ATXN7L3BQ96GX2 97 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 KIF1CO43896 1103 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 TUBB4AP04350 444 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ARL3P36405 182 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 FAPQ12884 760 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 NAALADL2Q58DX5 795 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 GPATCH4Q5T3I0 446 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 E4F1Q66K89 784 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 CYGBQ8WWM9 190 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 PPP6R2O75170 966 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 PYGBP11216 843 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ARHGAP15Q53QZ3 475 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 TADA2BQ86TJ2 420 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 RAB42Q8N4Z0 105 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 ARHGAP45Q92619 1136 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 KCNJ14Q9UNX9 436 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 TADA2AO75478 443 aa11.84□□□□□ -0.51
CACNA1C-208ENST00000399601 PUDPQ08623 228 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms