RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 RNF149Q8NC42 400 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 PBXIP1Q96AQ6 731 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 ZNF512BQ96KM6 892 aaPredicted RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 RHOXF2Q9BQY4 288 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 CABYRO75952 493 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 PAPOLAP51003 745 aaKnown RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 EFHC2Q5JST6 749 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 NXNQ6DKJ4 435 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 USP17L6PQ6QN14 398 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 FAM217BQ9NTX9 383 aaPredicted RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 RWDD2AQ9UIY3 292 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 SLC13A4Q9UKG4 626 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 UBE4BO95155 1302 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 DEPDC5O75140 1603 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 TMEM247A6NEH6 219 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 M0QYV0 167 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 KCNK3O14649 394 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 PHEXP78562 749 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 SLC39A14Q15043 492 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 STILQ15468 1287 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 ZNF484Q5JVG2 852 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 HDXQ7Z353 690 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 SKA1Q96BD8 255 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 BAG5Q9UL15 447 aa8.52□□□□□ -1.04
USP47-203ENST00000399455 A0A1W2PQ27 194 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 A0A1W2PQ64 194 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 A0A1W2PQD8 194 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 DUOXA2Q1HG44 320 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 GKAP1Q5VSY0 366 aaPredicted RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 ARMC6Q6NXE6 501 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 ARHGAP24Q8N264 748 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 HSPH1Q92598 858 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 STMN2Q93045 179 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 RPGRIP1Q96KN7 1286 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 EIF2AK1Q9BQI3 630 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 RNASEH1O60930 286 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 ATXN8OSP0DMR3 200 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 ADORA2BP29275 332 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 RBP5P82980 135 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 TDRD10Q5VZ19 366 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 PDXDC1Q6P996 788 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 INTS5Q6P9B9 1019 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 RDM1Q8NG50 284 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 TUBGCP2Q9BSJ2 902 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 VCXQ9H320 206 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 HYOU1Q9Y4L1 999 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 DGAT1O75907 488 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 BACE1P56817 501 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 MAPRE1Q15691 268 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 ITIH5Q86UX2 942 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 CLIC6Q96NY7 704 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 MTMR4Q9NYA4 1195 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 GSPT1P15170 499 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 COPB1P53618 953 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 ATN1P54259 1190 aaPredicted RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 MESDQ14696 234 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 LRRC41Q15345 812 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 ENOSF1Q7L5Y1 443 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 SLC44A5Q8NCS7 719 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 PCSK1P29120 753 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 PNPLA4P41247 253 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 CREMQ03060 361 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 MTX1Q13505 466 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 CEP55Q53EZ4 464 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 SH2D4BQ5SQS7 431 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 TMEM35BQ8NCS4 154 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 PDCD6IPQ8WUM4 868 aaKnown RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 CALN1Q9BXU9 219 aa8.52□□□□□ -1.05
USP47-203ENST00000399455 RBAKQ9NYW8 714 aaPredicted RBP8.52□□□□□ -1.05
USP47-203ENST00000399455 YWHAGP61981 247 aaKnown RBP eCLIP8.51□□□□□ -1.05
USP47-203ENST00000399455 PTPROQ16827 1216 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 MAP1SQ66K74 1059 aaPredicted RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 ZKSCAN4Q969J2 545 aaPredicted RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 DCUN1D1Q96GG9 259 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 RNF208Q9H0X6 261 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 LRRN2O75325 713 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 CAP2P40123 477 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 UNC13DQ70J99 1090 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 CCDC13Q8IYE1 715 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 SH3KBP1Q96B97 665 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 GPRASP2Q96D09 838 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ZDHHC15Q96MV8 337 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 AGO2Q9UKV8 859 aaKnown RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 SRGNP10124 158 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 FKBP1AP62942 108 aaKnown RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 RBBP5Q15291 538 aaKnown RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 CEP85LQ5SZL2 805 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 SYT10Q6XYQ8 523 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ENAHQ8N8S7 591 aaPredicted RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 TDRD7Q8NHU6 1098 aaKnown RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 FAM76AQ8TAV0 307 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 RABGGTAQ92696 567 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ZNF512Q96ME7 567 aaPredicted RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 PRMT7Q9NVM4 692 aaPredicted RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 STRNO43815 780 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 NDUFB10O96000 172 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 TAP1Q03518 808 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 CDO1Q16878 200 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms