RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 GRM6O15303 877 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 ASAP2O43150 1006 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 OR52Z1P0C646 297 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 BMP1P13497 986 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 ATP2B1P20020 1258 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 MCM2P49736 904 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 COL19A1Q14993 1142 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 RSPH1Q8WYR4 309 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 NLRP4Q96MN2 994 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 MTRQ99707 1265 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 TMEM117Q9H0C3 514 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 UBE2ZQ9H832 354 aaPredicted RBP16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 IFT122Q9HBG6 1241 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 NOL7Q9UMY1 257 aaKnown RBP16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 PLAGL2Q9UPG8 496 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 PLXNA4Q9HCM2 1894 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 MUC3AQ02505 3323 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 TBKBP1A7MCY6 615 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 CSDE1O75534 798 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 EOMESO95936 686 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 FGFR1P11362 822 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 FGFR4P22455 802 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 CSPP1Q1MSJ5 1256 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 SRGAP1Q7Z6B7 1085 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 ZNF598Q86UK7 904 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 KSR1Q8IVT5 923 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 ADAMTS19Q8TE59 1207 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 PRPF31Q8WWY3 499 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 TUFT1Q9NNX1 390 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 AAASQ9NRG9 546 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 RNF19AQ9NV58 838 aa16.59■□□□□ 0.25
SMIM11A-203ENST00000399299 TCF20Q9UGU0 1960 aaKnown RBP16.58■□□□□ 0.25
SMIM11A-203ENST00000399299 DGAT1O75907 488 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 ITGB1P05556 798 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 ATF7P17544 494 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 RARRES1P49788 294 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 KCNQ1P51787 676 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 LAMTOR4Q0VGL1 99 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 MXD4Q14582 209 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 ZNF174Q15697 407 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 TCEAL5Q5H9L2 206 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 CATSPER4Q7RTX7 472 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 LRRC43Q8N309 656 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 KLHL23Q8NBE8 558 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 SPPL3Q8TCT6 385 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 TMEM143Q96AN5 459 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 CASD1Q96PB1 797 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 ALG13Q9NP73 1137 aaKnown RBP16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 XPNPEP1Q9NQW7 623 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 AGPAT5Q9NUQ2 364 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 PIN4Q9Y237 131 aaKnown RBP16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 PCDHB12Q9Y5F1 795 aa16.58■□□□□ 0.24
SMIM11A-203ENST00000399299 NCK2O43639 380 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 SKIP12755 728 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 LAG3P18627 525 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 PHKA2P46019 1235 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 RAB27AP51159 221 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 UBE3AQ05086 875 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 POU5F1BQ06416 359 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 CAMK1Q14012 370 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 PCBP1Q15365 356 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 ABI1Q8IZP0 508 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 PABPC5Q96DU9 382 aaKnown RBP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 CCDC43Q96MW1 224 aaKnown RBP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 UHRF1Q96T88 793 aaPredicted RBP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 POLR3CQ9BUI4 534 aaPredicted RBP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 CWH43Q9H720 699 aa16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 BMP2KQ9NSY1 1161 aaPredicted RBP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 TYW1Q9NV66 732 aaKnown RBP16.57■□□□□ 0.24
SMIM11A-203ENST00000399299 ZNF623O75123 536 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 MUTP22033 750 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 RPA1P27694 616 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 TECP42680 631 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 LEXMQ3ZCV2 418 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 CLLU1OSQ5K130 101 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 SPOUT1Q5T280 376 aaKnown RBP16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 C4orf32Q8N8J7 132 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 RNF149Q8NC42 400 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 PIGOQ8TEQ8 1089 aa16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 MRPL9Q9BYD2 267 aaKnown RBP16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 DBR1Q9UK59 544 aaKnown RBP16.56■□□□□ 0.24
SMIM11A-203ENST00000399299 MED24O75448 989 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 SRGAP2CP0DJJ0 459 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 DNAJB1P25685 340 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 ARL2P36404 184 aa16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 TOB1P50616 345 aaPredicted RBP16.55■□□□□ 0.24
SMIM11A-203ENST00000399299 PTENP60484 403 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms