RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 INF2Q27J81 1249 aa13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 FAM117BQ6P1L5 589 aa13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 MOXD1Q6UVY6 613 aa13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 TRMT1LQ7Z2T5 733 aaKnown RBP13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 CERS4Q9HA82 394 aa13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 NRBP2Q9NSY0 501 aa13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
SMIM11A-201ENST00000399292 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.28
SMIM11A-201ENST00000399292 TET1Q8NFU7 2136 aa13.27□□□□□ -0.28
SMIM11A-201ENST00000399292 SOBPA7XYQ1 873 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 RBAK-RBAKDNI3L0D1 243 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 LARGE1O95461 756 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 JAK3P52333 1124 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 TMEM62Q0P6H9 643 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 ADGRE1Q14246 886 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 LPIN1Q14693 890 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 LETM2Q2VYF4 491 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 FBXO47Q5MNV8 452 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 VASH1Q7L8A9 365 aaPredicted RBP13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 NEK8Q86SG6 692 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 MEIOBQ8N635 442 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 NSUN7Q8NE18 718 aaKnown RBP13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 BRMS1Q9HCU9 246 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 TRPV2Q9Y5S1 764 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 SQORQ9Y6N5 450 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 COL1A2P08123 1366 aa13.27□□□□□ -0.29
SMIM11A-201ENST00000399292 XIRP2A4UGR9 3374 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 LCHNA4D1U4 455 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 CHMP2AO43633 222 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 PSMD10O75832 226 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 UPP2O95045 317 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 KRT2P35908 639 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 TRIM29Q14134 588 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 C6orf118Q5T5N4 469 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 PIK3AP1Q6ZUJ8 805 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 KIAA0319LQ8IZA0 1049 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 RDM1Q8NG50 284 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 PPM1EQ8WY54 764 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 ARNTL2Q8WYA1 636 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 GJA10Q969M2 543 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 FAM167AQ96KS9 214 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 NAP1L4Q99733 375 aaKnown RBP13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 CELF4Q9BZC1 486 aaKnown RBP13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 UNC45AQ9H3U1 944 aa13.26□□□□□ -0.29
SMIM11A-201ENST00000399292 REV3LO60673 3130 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 ZBTB42B2RXF5 422 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 RFXAPO00287 272 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 ENPP3O14638 875 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 MAGEB2O15479 319 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 MARCH6O60337 910 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 CCNT1O60563 726 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 JAK2O60674 1132 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 ARHGEF15O94989 841 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 GCFC2P16383 781 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 SKIV2LQ15477 1246 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 METTL13Q8N6R0 699 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 ETNPPLQ8TBG4 499 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 ZSCAN31Q96LW9 406 aaPredicted RBP13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 AGO3Q9H9G7 860 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 VCANP13611 3396 aa13.25□□□□□ -0.29
SMIM11A-201ENST00000399292 IGSF9BQ9UPX0 1349 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 SLC37A4O43826 429 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 ZNF862O60290 1169 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 TMOD1P28289 359 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 CD52P31358 61 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 HTRA4P83105 476 aaPredicted RBP13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 LINC00528Q8N1L1 170 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 TGS1Q96RS0 853 aaKnown RBP13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 YME1L1Q96TA2 773 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 KIF2CQ99661 725 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 FTHL17Q9BXU8 183 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 GINS2Q9Y248 185 aa13.24□□□□□ -0.29
SMIM11A-201ENST00000399292 TTC28Q96AY4 2481 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 BTBD18B2RXH4 712 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 TBX3O15119 743 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 MAN1A2O60476 641 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 C22orf31O95567 290 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 MMP1P03956 469 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 ERVK-21P61565 698 aa13.23□□□□□ -0.29
SMIM11A-201ENST00000399292 PAK2Q13177 524 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms