RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 TRIM33Q9UPN9 1127 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 ANGPTL3Q9Y5C1 460 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 PITPNM2Q9BZ72 1349 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 CCT8L1PA6NM43 557 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 KCNB1Q14721 858 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 CDO1Q16878 200 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 LONRF1Q17RB8 773 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 KIAA0825Q8IV33 1275 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 KIF2BQ8N4N8 673 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.22□□□□□ -0.933e-6■■■■■ 50.8
CTNND1-205ENST00000399050 ATP6V1E2Q96A05 226 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 TUBE1Q9UJT0 475 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 CLTCL1P53675 1640 aa9.22□□□□□ -0.93
CTNND1-205ENST00000399050 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-205ENST00000399050 H0YIN7 160 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 RAD51CO43502 376 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 KRT38O76015 456 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 FAM107AO95990 144 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 HOXA13P31271 388 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-205ENST00000399050 RCAN1P53805 252 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 IZUMO3Q5VZ72 239 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 ZNF746Q6NUN9 644 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-205ENST00000399050 MIS18BP1Q6P0N0 1132 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 RFFLQ8WZ73 363 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 RNF25Q96BH1 459 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-205ENST00000399050 CCDC124Q96CT7 223 aaKnown RBP9.21□□□□□ -0.93
CTNND1-205ENST00000399050 TMEM260Q9NX78 707 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 GYPCP04921 128 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 CYP2D6P10635 497 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 ALDH1B1P30837 517 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 GCLMP48507 274 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 PRKG1Q13976 671 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 CCDC92Q53HC0 331 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-205ENST00000399050 KIAA1755Q5JYT7 1200 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 LARGE2Q8N3Y3 721 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 ARL8AQ96BM9 186 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 SLC13A1Q9BZW2 595 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 SCHIP1Q9P0W5 487 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-205ENST00000399050 TET3O43151 1660 aa9.21□□□□□ -0.93
CTNND1-205ENST00000399050 PI4K2BG5E9Z4 385 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 ENO1P06733 434 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 PCYT1AP49585 367 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 ERFEQ4G0M1 354 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 NUDCD3Q8IVD9 361 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.21□□□□□ -0.949e-8■□□□□ 10.6
CTNND1-205ENST00000399050 WARS2Q9UGM6 360 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 HEG1Q9ULI3 1381 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 SOX5P35711 763 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 CRKLP46109 303 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 CARSP49589 748 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 IGBP1P78318 339 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 TFDP1Q14186 410 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 MARCH10Q8NA82 808 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 POLR3CQ9BUI4 534 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 NOD2Q9HC29 1040 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 ALG13Q9NP73 1137 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 NPHS2Q9NP85 383 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 XDHP47989 1333 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 USP42Q9H9J4 1324 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 M0QZ92 97 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 NVLO15381 856 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 HNRNPCL1O60812 293 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 CCDC22O60826 627 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 ABCD1P33897 745 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 PEX3P56589 373 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 GUF1Q8N442 669 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 PPM1NQ8N819 430 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 LBHD1Q9BQE6 289 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.21□□□□□ -0.94
CTNND1-205ENST00000399050 STRIP2Q9ULQ0 834 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 LEMD3Q9Y2U8 911 aa9.21□□□□□ -0.94
CTNND1-205ENST00000399050 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 IGF2BP3O00425 579 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ERFP50548 548 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 COPS2P61201 443 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 SEMA3FQ13275 785 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 STAT4Q14765 748 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 RARS2Q5T160 578 aaKnown RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 CYB5D1Q6P9G0 228 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 DGKHQ86XP1 1220 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 GLYCTKQ8IVS8 523 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 MMGT1Q8N4V1 131 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 FBXL13Q8NEE6 735 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 FAM149B1Q96BN6 582 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 KIFC3Q9BVG8 833 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 NBPF3Q9H094 633 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 TRABDQ9H4I3 376 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 PLA2R1Q13018 1463 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 POTECB2RU33 542 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 PHF2O75151 1096 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 GDF11O95390 407 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ALDH18A1P54886 795 aaKnown RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 HIC1Q14526 733 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 TAF1BQ53T94 588 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 HACE1Q8IYU2 909 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms