RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 GPBP1Q86WP2 473 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ANKRD13AQ8IZ07 590 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 OR6B3Q8NGW1 331 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 TCF25Q9BQ70 676 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SUDS3Q9H7L9 328 aaPredicted RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 HCN3Q9P1Z3 774 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 TRIM10Q9UDY6 481 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 USP20Q9Y2K6 914 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 PPP1R12AO14974 1030 aaPredicted RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 MAGEB2O15479 319 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 SYT1P21579 422 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 SCP2P22307 547 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 TRIM67Q6ZTA4 783 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 VSIG1Q86XK7 387 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 LARP4BQ92615 738 aaKnown RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 CCDC3Q9BQI4 270 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 ACTR5Q9H9F9 607 aaPredicted RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 MYO1AQ9UBC5 1043 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 MRPS17Q9Y2R5 130 aaKnown RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 RWDD3Q9Y3V2 267 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 MAST1Q9Y2H9 1570 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 TTLL13PA6NNM8 815 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 S100GP29377 79 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 HIST2H2ACQ16777 129 aaPredicted RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 CENPPQ6IPU0 288 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 FAM47EQ6ZV65 393 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 CEP68Q76N32 757 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 UBE2Q2Q8WVN8 375 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 BBS4Q96RK4 519 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 TRIM4Q9C037 500 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 MRPL46Q9H2W6 279 aaKnown RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 MLH3Q9UHC1 1453 aa5.34□□□□□ -1.56
TTC3-204ENST00000399017 EDC4Q6P2E9 1401 aaKnown RBP5.34□□□□□ -1.56
TTC3-204ENST00000399017 ESPNB1AK53 854 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 BUB1BO60566 1050 aaPredicted RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 RHOBTB3O94955 611 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 EIF2S1P05198 315 aaKnown RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 PCSK1P29120 753 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 TCEA2Q15560 299 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 BMP2KLQ5H9B9 411 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 PLEKHM3Q6ZWE6 761 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 SKAP1Q86WV1 359 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 GMCL1Q96IK5 515 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 FAM96AQ9H5X1 160 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 YY1AP1Q9H869 796 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 A0A088AWK7 358 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 H7C0S8 307 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 GPR182O15218 404 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 SUPT3HO75486 399 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ZNF10P21506 573 aaPredicted RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 EEF1GP26641 437 aaKnown RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 VPS41P49754 854 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 CYP2J2P51589 502 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 PAK2Q13177 524 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 MTMR1Q13613 665 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 NAALADL2Q58DX5 795 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.33□□□□□ -1.56
TTC3-204ENST00000399017 ZNF512Q96ME7 567 aaPredicted RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 ABCG4Q9H172 646 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ZC4H2Q9NQZ6 224 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 SVILO95425 2214 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ARAP3Q8WWN8 1544 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 PCF11O94913 1555 aaKnown RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 SMIM23A6NLE4 172 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 GGPS1O95749 300 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ADCY8P40145 1251 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ZAP70P43403 619 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 AP3M2P53677 418 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ITGADQ13349 1161 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 SUGP1Q8IWZ8 645 aaKnown RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 MMGT1Q8N4V1 131 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 TMEM199Q8N511 208 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 MOSPD2Q8NHP6 518 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 NSUN6Q8TEA1 469 aaKnown RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 XAGE2Q96GT9 111 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 SPATA33Q96N06 139 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 KLC2Q9H0B6 622 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 GPN3Q9UHW5 284 aaPredicted RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 FAM32AQ9Y421 112 aaKnown RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 SYNRGQ9UMZ2 1314 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ARID1BQ8NFD5 2236 aaPredicted RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 MARK3P27448 753 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 CYP2C19P33261 490 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 LPAR1Q92633 364 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 HEXIM2Q96MH2 286 aaKnown RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 TUBB6Q9BUF5 446 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 MUC3BQ9H195 1237 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 WDR41Q9HAD4 459 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ABCF3Q9NUQ8 709 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 SLC39A10Q9ULF5 831 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 MAGED2Q9UNF1 606 aaPredicted RBP5.33□□□□□ -1.56
TTC3-204ENST00000399017 C21orf2O43822 256 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 MCF2P10911 925 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 PCK1P35558 622 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 IFNAR2P48551 515 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 CUL4AQ13619 759 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 ZNF235Q14590 738 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 SLC9A5Q14940 896 aa5.33□□□□□ -1.56
TTC3-204ENST00000399017 GNASQ5JWF2 1037 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms