RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 P4HBP07237 508 aaKnown RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 RASSF2P50749 326 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 CLCN6P51797 869 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 KRT76Q01546 638 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 TTLL4Q14679 1199 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 PDIA6Q15084 440 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 SPOPLQ6IQ16 392 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 LMNTD2Q8IXW0 634 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 PRPF31Q8WWY3 499 aaKnown RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 CACYBPQ9HB71 228 aaKnown RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 BAG5Q9UL15 447 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 LRRC53A6NM62 1247 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 MT-ND3P03897 115 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 PMLP29590 882 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 RNF10Q8N5U6 811 aaKnown RBP12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 TMEM35BQ8NCS4 154 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 PARD6BQ9BYG5 372 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 ACAD9Q9H845 621 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
PCDHGA8-201ENST00000398604 KIF28PB7ZC32 967 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 NDUFB10O96000 172 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CSF1RP07333 972 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CTSHP09668 335 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 TXNP10599 105 aaKnown RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 NMT1P30419 496 aaKnown RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 GBP1P32455 592 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 TSNAXIP1Q2TAA8 658 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 ANGEL2Q5VTE6 544 aaKnown RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 PDIK1LQ8N165 341 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 RNF149Q8NC42 400 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CFAP36Q96G28 342 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 SPON2Q9BUD6 331 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 FAM217BQ9NTX9 383 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 NFU1Q9UMS0 254 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 NOVA2Q9UNW9 492 aaKnown RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 PI4K2BG5E9Z4 385 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 DYNC1LI2O43237 492 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 TOM1L1O75674 476 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 RARBP10826 455 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CA4P22748 312 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 TTC25Q96NG3 672 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 PIK3R2O00459 728 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 GFPT1Q06210 699 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 GRM4Q14833 912 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 DBN1Q16643 649 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CASQ2O14958 399 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 SART1O43290 800 aaKnown RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CREB3O43889 395 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 MFAP3LO75121 409 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 MYBP10242 640 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 PHKA2P46019 1235 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 RWDD2BP57060 319 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 TCP11Q8WWU5 503 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 FGD4Q96M96 766 aa12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA8-201ENST00000398604 HIP1RO75146 1068 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 PALMO75781 387 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 LDHAP00338 332 aaKnown RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 C6orf222P0C671 652 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 CYP2B6P20813 491 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 COPB2P35606 906 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 PYROXD1Q8WU10 500 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 PRDM5Q9NQX1 630 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 RFX7Q2KHR2 1363 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 SRGAP2BP0DMP2 458 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 SERPINB6P35237 376 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 SLMAPQ14BN4 828 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 TAF1CQ15572 869 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 KNOP1Q1ED39 458 aaKnown RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 HAUS6Q7Z4H7 955 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 RAD54LQ92698 747 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 MMP19Q99542 508 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 EIF2AK1Q9BQI3 630 aaKnown RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 TRIM56Q9BRZ2 755 aaKnown RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 VCXQ9H320 206 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 RGPD1P0DJD0 1748 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 A0A1B0GUA9 196 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 ESYT3A0FGR9 886 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 GOLGA8KD6RF30 607 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 IL9RQ01113 521 aa12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
PCDHGA8-201ENST00000398604 SURF1Q15526 300 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms