RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 ASGR1P07306 291 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 SMIM10L2AP0DMW4 78 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 SMIM10L2BP0DMW5 78 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 MAPTP10636 758 aaKnown RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 SCP2P22307 547 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 ERCC5P28715 1186 aaPredicted RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 ZNF131P52739 623 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 PEX3P56589 373 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 RTP1P59025 263 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 STK4Q13043 487 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 PAK1Q13153 545 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 TFDP1Q14186 410 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 MXD4Q14582 209 aaPredicted RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 KCNA10Q16322 511 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 FAM47CQ5HY64 1035 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 CXCL17Q6UXB2 119 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 SMYD4Q8IYR2 804 aaPredicted RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 PDCD7Q8N8D1 485 aaKnown RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 RNF214Q8ND24 703 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 DEPTORQ8TB45 409 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 DHTKD1Q96HY7 919 aaPredicted RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 GLT1D1Q96MS3 346 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 BPIFA3Q9BQP9 254 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 TSEN34Q9BSV6 310 aaKnown RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 KMT5AQ9NQR1 393 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.67■□□□□ 0.1
SKA1-202ENST00000398452 EXOC7Q9UPT5 735 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 MYADML2A6NDP7 307 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 ASAP2O43150 1006 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 KLRC1P26715 233 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 PRCPP42785 496 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 EFCAB12Q6NXP0 572 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 C11orf57Q6ZUT1 292 aaPredicted RBP15.66■□□□□ 0.1
SKA1-202ENST00000398452 SYCP3Q8IZU3 236 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
SKA1-202ENST00000398452 KLHDC9Q8NEP7 349 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 TRAPPC12Q8WVT3 735 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 ANP32BQ92688 251 aaKnown RBP15.66■□□□□ 0.1
SKA1-202ENST00000398452 TMEM143Q96AN5 459 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 SCLT1Q96NL6 688 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 HTATIP2Q9BUP3 242 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 POLD4Q9HCU8 107 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 GPRC5CQ9NQ84 441 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 SETD4Q9NVD3 440 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 SUCLA2Q9P2R7 463 aaPredicted RBP15.66■□□□□ 0.1
SKA1-202ENST00000398452 CTNND2Q9UQB3 1225 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 UBE4BO95155 1302 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 PHLPP2Q6ZVD8 1323 aa15.66■□□□□ 0.1
SKA1-202ENST00000398452 LRRIQ4A6NIV6 560 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 EIF3DO15371 548 aaKnown RBP eCLIP15.65■□□□□ 0.1
SKA1-202ENST00000398452 FGFR1OPO95684 399 aaKnown RBP15.65■□□□□ 0.1
SKA1-202ENST00000398452 NAMPTP43490 491 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 CDC42EP1Q00587 391 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 MYL5Q02045 173 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 LRRC41Q15345 812 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 COBLL1Q53SF7 1204 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 MTHFD1LQ6UB35 978 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 ZBTB8OSQ8IWT0 167 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 ADSSL1Q8N142 457 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 SPIRE2Q8WWL2 714 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 NELFBQ8WX92 580 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 KAT2BQ92831 832 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 HPS3Q969F9 1004 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 TMEM206Q9H813 350 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 CBX8Q9HC52 389 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 XPNPEP1Q9NQW7 623 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 RWDD2AQ9UIY3 292 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 AKT3Q9Y243 479 aa15.65■□□□□ 0.1
SKA1-202ENST00000398452 HAS3O00219 553 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 C22orf31O95567 290 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 RPLP2P05387 115 aaKnown RBP15.64■□□□□ 0.09
SKA1-202ENST00000398452 BMP6P22004 513 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 NMT1P30419 496 aaKnown RBP15.64■□□□□ 0.09
SKA1-202ENST00000398452 EHHADHQ08426 723 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 STRN3Q13033 797 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 MAPK7Q13164 816 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 HS2ST1Q7LGA3 356 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 ZNF720Q7Z2F6 126 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 RSPH3Q86UC2 560 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 RHPN2Q8IUC4 686 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 DAW1Q8N136 415 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 LRRC71Q8N4P6 559 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 AOPEPQ8N6M6 819 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 KIAA0895Q8NCT3 520 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 ANKRD20A12PQ8NF67 263 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 DIS3LQ8TF46 1054 aaKnown RBP15.64■□□□□ 0.09
SKA1-202ENST00000398452 LMBR1Q8WVP7 490 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 HVCN1Q96D96 273 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 PAWRQ96IZ0 340 aaKnown RBP15.64■□□□□ 0.09
SKA1-202ENST00000398452 ACCSQ96QU6 501 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 C2orf40Q9H1Z8 148 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 PDLIM7Q9NR12 457 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 NOD1Q9Y239 953 aa15.64■□□□□ 0.09
SKA1-202ENST00000398452 IGKV6-21A0A0C4DH24 114 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 PPP1R3GB7ZBB8 358 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 IKBKBO14920 756 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 SLC16A4O15374 487 aa15.63■□□□□ 0.09
SKA1-202ENST00000398452 CALUO43852 315 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms