RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 LTBP1Q14766 1721 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 SNED1Q8TER0 1413 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 GOLGA6L7A0A1B0GV03 622 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 TTLL13PA6NNM8 815 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CCDC169A6NNP5 214 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 PLOD2O00469 737 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CUTAO60888 179 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 POTEJP0CG39 1038 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 PRKAR2AP13861 404 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 H2AFXP16104 143 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 PSMA4P25789 261 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 HNRNPH1P31943 449 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 HOXD12P35452 270 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CASP7P55210 303 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 FOXO4P98177 505 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ARID5AQ03989 594 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 KDELC1Q6UW63 502 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 NLRP9Q7RTR0 991 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ZER1Q7Z7L7 766 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 MB21D2Q8IYB1 491 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 LSMEM2Q8N112 164 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 PPP1R14CQ8TAE6 165 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 OSBP2Q969R2 916 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 SNX27Q96L92 541 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 BZW2Q9Y6E2 419 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ABCC12Q96J65 1359 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ZMYM6O95789 1325 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CHUKO15111 745 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CYP27B1O15528 508 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 UBL4AP11441 157 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 PBLDP30039 288 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 PRKAR1BP31321 381 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 IARSP41252 1262 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CLCN6P51797 869 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 TCIRG1Q13488 830 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 USH1GQ495M9 461 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CABP7Q86V35 215 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 DGKHQ86XP1 1220 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 VPS37DQ86XT2 251 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 MTMR14Q8NCE2 650 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 FATE1Q969F0 183 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 SPDL1Q96EA4 605 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ZBTB14O43829 449 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 PLTPP55058 493 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TUBA4AP68366 448 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 ZNF600Q6ZNG1 722 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TMC4Q7Z404 712 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 VSTM4Q8IW00 320 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 ENAHQ8N8S7 591 aaPredicted RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 OXER1Q8TDS5 423 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 HPS4Q9NQG7 708 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TUBE1Q9UJT0 475 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CDV3Q9UKY7 258 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 MKI67P46013 3256 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 LAMB2P55268 1798 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CYP2D7A0A087X1C5 515 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 RASSF10A6NK89 507 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 GPAA1O43292 621 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TIPRLO75663 272 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CCNG2Q16589 344 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 LRRC24Q50LG9 513 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 KRT40Q6A162 431 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TWF2Q6IBS0 349 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 GALNT5Q7Z7M9 940 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TRIM22Q8IYM9 498 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 SMC1BQ8NDV3 1235 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 XAGE2Q96GT9 111 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 C7orf25Q9BPX7 421 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 NUDT12Q9BQG2 462 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TEX13BQ9BXU2 312 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 DDX18Q9NVP1 670 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 SAGE1Q9NXZ1 904 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 HESX1Q9UBX0 185 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 MTRF1LQ9UGC7 380 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 AGO2Q9UKV8 859 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 SPEF2Q9C093 1822 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 POTEFA5A3E0 1075 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 K7ENM7 598 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CETN3O15182 167 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 ZNF3P17036 446 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CES1P23141 567 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CETN2P41208 172 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 RENBPP51606 427 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 GNG11P61952 73 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 IFIT5Q13325 482 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 NFE2L1Q14494 772 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 NCAPHQ15003 741 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CEP78Q5JTW2 689 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 LRP10Q7Z4F1 713 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 NLRP7Q8WX94 980 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 MAELQ96JY0 434 aaKnown RBP7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 HERPUD2Q9BSE4 406 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 BHMT2Q9H2M3 363 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 ZBTB3Q9H5J0 574 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 CEP72Q9P209 647 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 KCNH3Q9ULD8 1083 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 AGTPBP1Q9UPW5 1226 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 TMX2Q9Y320 296 aa7.1□□□□□ -1.27
TM9SF4-202ENST00000398022 MAFBQ9Y5Q3 323 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms