RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 NOP56O00567 594 aaKnown RBP7.58□□□□□ -1.2
SMCO1-201ENST00000397537 ADH1CP00326 375 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 ALOX12P18054 663 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 AGXTP21549 392 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 CTSSP25774 331 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 MC4RP32245 332 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 PHKA1P46020 1223 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 PTPN5P54829 565 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 LRFN4Q6PJG9 635 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 ABRAXAS1Q6UWZ7 409 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 USP53Q70EK8 1073 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 NLRP14Q86W24 1093 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 RFFLQ8WZ73 363 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 C18orf8Q96DM3 657 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 ORAI2Q96SN7 254 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 EMILIN2Q9BXX0 1053 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 AGXT2Q9BYV1 514 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 IL21Q9HBE4 155 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 HAUS2Q9NVX0 235 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 VPS28Q9UK41 221 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 KNSTRNQ9Y448 316 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 ABCC1P33527 1531 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 TMEM110-MUSTN1A8MSY1 372 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 INO80B-WBP1J3KQ70 363 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 SLC7A4O43246 635 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 SGPL1O95470 568 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 THP07101 528 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 CLTBP09497 229 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 STMN1P16949 149 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 PHKA2P46019 1235 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 CTCFP49711 727 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 KIF23Q02241 960 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 MAP2K1Q02750 393 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 FOXO1Q12778 655 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ERV3-1Q14264 604 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ZKSCAN8Q15776 578 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 UAP1L1Q3KQV9 507 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 MMEL1Q495T6 779 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ZMYM1Q5SVZ6 1142 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 SLC35F1Q5T1Q4 408 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 MAEAQ7L5Y9 396 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 EFHBQ8N7U6 833 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 TDRD7Q8NHU6 1098 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 RILPL2Q969X0 211 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 CNPPD1Q9BV87 410 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ZCCHC2Q9C0B9 1178 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 GRIP2Q9C0E4 1043 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 SPON1Q9HCB6 807 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 RAI14Q9P0K7 980 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 PCDHA4Q9UN74 947 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 AKT3Q9Y243 479 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 PI4KAP2A4QPH2 592 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ERICH4A6NGS2 130 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 LGALS16A8MUM7 142 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 F8W031 263 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ARVCFO00192 962 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 PDE2AO00408 941 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ELL2O00472 640 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 AKR1B10O60218 316 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 HARSP12081 509 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 KRT10P13645 584 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 KCNJ6P48051 423 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 TRIM32Q13049 653 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 MOGSQ13724 837 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 SNX17Q15036 470 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 SETMARQ53H47 684 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 UTP14CQ5TAP6 766 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 TRIM68Q6AZZ1 485 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 DENND5AQ6IQ26 1287 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 MTDHQ86UE4 582 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 MOGAT3Q86VF5 341 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 THEMISQ8N1K5 641 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 RIN2Q8WYP3 895 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 RBM18Q96H35 190 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 C7orf26Q96N11 449 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 CGRRF1Q99675 332 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 TRIM6Q9C030 488 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 DEF6Q9H4E7 631 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 XAB2Q9HCS7 855 aaKnown RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 PREBQ9HCU5 417 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 OBP2BQ9NPH6 170 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 PRDM5Q9NQX1 630 aaPredicted RBP7.57□□□□□ -1.2
SMCO1-201ENST00000397537 DNAJC28Q9NX36 388 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 TMOD4Q9NZQ9 345 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 KIF17Q9P2E2 1029 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 SIK3Q9Y2K2 1263 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 ZNF451Q9Y4E5 1061 aa7.57□□□□□ -1.2
SMCO1-201ENST00000397537 LCHNA4D1U4 455 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 NDUFS2O75306 463 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 ALAS1P13196 640 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 POLD2P49005 469 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 CLCN2P51788 898 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 TPD52P55327 224 aaPredicted RBP7.56□□□□□ -1.2
SMCO1-201ENST00000397537 AP1B1Q10567 949 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 HYAL2Q12891 473 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 NR5A1Q13285 461 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 CUL4AQ13619 759 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 RASA2Q15283 850 aa7.56□□□□□ -1.2
SMCO1-201ENST00000397537 METTL24Q5JXM2 366 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms