RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 REEP2Q9BRK0 252 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 TDRD3Q9H7E2 651 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 MAGEF1Q9HAY2 307 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 STIM2Q9P246 746 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 ZNF831Q5JPB2 1677 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CEP350Q5VT06 3117 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CLRN2A0PK11 232 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 F5H6K3 240 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 LRRN2O75325 713 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 FGFR1OPO95684 399 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 HPDP32754 393 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 CRKP46108 304 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 MXRA7P84157 204 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 KLRC3Q07444 240 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CUL3Q13618 768 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CRY2Q49AN0 593 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 HAUS3Q68CZ6 603 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 OR2W6PQ8NHA6 318 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 L3MBTL3Q96JM7 780 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 GORASP1Q9BQQ3 440 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 OSBPL1AQ9BXW6 950 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 SLC5A4Q9NY91 659 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 AJAP1Q9UKB5 411 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 HDAC9Q9UKV0 1011 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 G3BP2Q9UN86 482 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 GAKO14976 1311 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 GOLGA6L10A0A0M3HER8 536 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 A0A1W2PQJ5 194 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 ZNF233A6NK53 670 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 MEIS2O14770 477 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 BACH1O14867 736 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 PPIP5K2O43314 1243 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 TRAPPC3O43617 180 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CEP104O60308 925 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 AKAP3O75969 853 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 RNF8O76064 485 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 GH2P01242 217 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 GSTA1P08263 222 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CCND1P24385 295 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CDC25CP30307 473 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 NMT1P30419 496 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 ARHGAP4P98171 946 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 PAK2Q13177 524 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 ITGB3BPQ13352 177 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 ARHGAP44Q17R89 818 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CPLX4Q7Z7G2 160 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 IFT20Q8IY31 132 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 IQCKQ8N0W5 287 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 PROM2Q8N271 834 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CCT6BQ92526 530 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 GJD4Q96KN9 370 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 ANKRD27Q96NW4 1050 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 RUSC1Q9BVN2 902 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 MOV10L1Q9BXT6 1211 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 L3MBTL1Q9Y468 752 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 DNAH12Q6ZR08 3092 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 ADAMTSL1Q8N6G6 1762 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CDK5RAP2Q96SN8 1893 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 C5orf60A6NFR6 353 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 TCP10L2B9ZVM9 353 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 POLRMTO00411 1230 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 EML1O00423 815 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 CETN3O15182 167 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 GFPT2O94808 682 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 XRCC5P13010 732 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 CLK2P49760 499 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 CYP2J2P51589 502 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ASIC2Q16515 512 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 CFAP221Q4G0U5 840 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 TMEM119Q4V9L6 283 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 MIGA2Q7L4E1 593 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ZNF571Q7Z3V5 609 aaPredicted RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 MAATS1Q7Z4T9 603 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ANKS4BQ8N8V4 417 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 RBM41Q96IZ5 413 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 PLEKHG4BQ96PX9 1271 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 PURBQ96QR8 312 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 TRIM4Q9C037 500 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 DDX47Q9H0S4 455 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 GOPCQ9HD26 462 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ARMCX3Q9UH62 379 aaPredicted RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 DNM3Q9UQ16 869 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ATP6V0A2Q9Y487 856 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ESYT2A0FGR8 921 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 CCT8L1PA6NM43 557 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 TISP43B9A030 160 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 SERPING1P05155 500 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 TRIM49P0CI25 452 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 TRIM49CP0CI26 452 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 SNHG28P0DPA3 235 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 TCP1P17987 556 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 CNGA1P29973 690 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 CHRNA5P30532 468 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 DYNC1I2Q13409 638 aaKnown RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 QPCTQ16769 361 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 EXOC3L4Q17RC7 722 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 ASTE1Q2TB18 679 aaPredicted RBP5.43□□□□□ -1.54
SSR1-202ENST00000397511 ZCWPW2Q504Y3 356 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 FIGNQ5HY92 759 aa5.43□□□□□ -1.54
SSR1-202ENST00000397511 GPATCH4Q5T3I0 446 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms