RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GRIK4Q16099 956 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 LINC01465Q8N7H1 131 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 PRPF31Q8WWY3 499 aaKnown RBP30.27■■■□□ 2.44
CPNE1-203ENST00000397442 EEF2KMTQ96G04 330 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 TSG101Q99816 390 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 ARHGAP28Q9P2N2 729 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 DDX20Q9UHI6 824 aaKnown RBP30.27■■■□□ 2.44
CPNE1-203ENST00000397442 KAT6AQ92794 2004 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 EFCAB12Q6NXP0 572 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 APTXQ7Z2E3 356 aaKnown RBP30.27■■■□□ 2.44
CPNE1-203ENST00000397442 NOC3LQ8WTT2 800 aaKnown RBP30.27■■■□□ 2.44
CPNE1-203ENST00000397442 TCP11Q8WWU5 503 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 TRIM5Q9C035 493 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 SPC25Q9HBM1 224 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 TYW1Q9NV66 732 aaKnown RBP30.27■■■□□ 2.44
CPNE1-203ENST00000397442 MAGEB2O15479 319 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 KPNA6O60684 536 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 SMIM10L2AP0DMW4 78 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 SMIM10L2BP0DMW5 78 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 NAMPTP43490 491 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 EDRF1Q3B7T1 1238 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 MTHFD1LQ6UB35 978 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 PPP4R3CPQ6ZMV5 832 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 ZC3H3Q8IXZ2 948 aaKnown RBP30.26■■■□□ 2.43
CPNE1-203ENST00000397442 KLHDC9Q8NEP7 349 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 ANP32BQ92688 251 aaKnown RBP30.26■■■□□ 2.43
CPNE1-203ENST00000397442 KCNN1Q92952 543 aa30.26■■■□□ 2.43
CPNE1-203ENST00000397442 ZNF75DP51815 510 aa30.25■■■□□ 2.43
CPNE1-203ENST00000397442 CAPSQ13938 189 aa30.25■■■□□ 2.43
CPNE1-203ENST00000397442 PPP2R5AQ15172 486 aa30.25■■■□□ 2.43
CPNE1-203ENST00000397442 PDLIM2Q96JY6 352 aa30.25■■■□□ 2.43
CPNE1-203ENST00000397442 SETD4Q9NVD3 440 aa30.25■■■□□ 2.43
CPNE1-203ENST00000397442 KCNG1Q9UIX4 513 aa30.25■■■□□ 2.43
CPNE1-203ENST00000397442 DENND3A2RUS2 1198 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 CDK11BP21127 795 aaKnown RBP30.24■■■□□ 2.43
CPNE1-203ENST00000397442 CLCN3P51790 818 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 CCSAPQ6IQ19 270 aaPredicted RBP30.24■■■□□ 2.43
CPNE1-203ENST00000397442 PPP1R13LQ8WUF5 828 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 LMBR1Q8WVP7 490 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 PSPC1Q8WXF1 523 aaKnown RBP30.24■■■□□ 2.43
CPNE1-203ENST00000397442 KATNAL1Q9BW62 490 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 TBX20Q9UMR3 447 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 PTPN22Q9Y2R2 807 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 NRCAMQ92823 1304 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 SCN10AQ9Y5Y9 1956 aa30.24■■■□□ 2.43
CPNE1-203ENST00000397442 CST5P28325 142 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-203ENST00000397442 FKBP3Q00688 224 aaKnown RBP30.23■■■□□ 2.43
CPNE1-203ENST00000397442 LAMTOR4Q0VGL1 99 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 TCP11X2Q5H9J9 407 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 TAS1R3Q7RTX0 852 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 METTL13Q8N6R0 699 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 RETREG2Q8NC44 543 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 HVCN1Q96D96 273 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 ACCSQ96QU6 501 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 IFNKQ9P0W0 207 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 SUCLA2Q9P2R7 463 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-203ENST00000397442 SIP14410 1827 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 RRN3P2A6NIE6 340 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 KCNJ18B7U540 433 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 CHMP4BP1P59074 171 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 KCNJ12Q14500 433 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 HIC1Q14526 733 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 MXD4Q14582 209 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-203ENST00000397442 MTG1Q9BT17 334 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-203ENST00000397442 GBP3Q9H0R5 595 aa30.23■■■□□ 2.43
CPNE1-203ENST00000397442 CALUO43852 315 aaPredicted RBP30.22■■■□□ 2.43
CPNE1-203ENST00000397442 GJB1P08034 283 aa30.22■■■□□ 2.43
CPNE1-203ENST00000397442 ADAM17P78536 824 aa30.22■■■□□ 2.43
CPNE1-203ENST00000397442 CXCL17Q6UXB2 119 aa30.22■■■□□ 2.43
CPNE1-203ENST00000397442 MAP4K3Q8IVH8 894 aa30.22■■■□□ 2.43
CPNE1-203ENST00000397442 NAP1L5Q96NT1 182 aaPredicted RBP30.22■■■□□ 2.43
CPNE1-203ENST00000397442 XPO4Q9C0E2 1151 aaKnown RBP30.22■■■□□ 2.43
CPNE1-203ENST00000397442 TMEM206Q9H813 350 aa30.22■■■□□ 2.43
CPNE1-203ENST00000397442 HMX1Q9NP08 348 aaPredicted RBP30.22■■■□□ 2.43
CPNE1-203ENST00000397442 LIMA1Q9UHB6 759 aaKnown RBP30.22■■■□□ 2.43
CPNE1-203ENST00000397442 LRRC10BA6NIK2 292 aa30.21■■■□□ 2.43
CPNE1-203ENST00000397442 LRRIQ4A6NIV6 560 aa30.21■■■□□ 2.43
CPNE1-203ENST00000397442 SERPINC1P01008 464 aa30.21■■■□□ 2.43
CPNE1-203ENST00000397442 SPAG1Q07617 926 aa30.21■■■□□ 2.43
CPNE1-203ENST00000397442 SH3TC2Q8TF17 1288 aa30.21■■■□□ 2.43
CPNE1-203ENST00000397442 MBLAC1A4D2B0 266 aaPredicted RBP30.2■■■□□ 2.43
CPNE1-203ENST00000397442 H0YCG3 227 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 EEF1GP26641 437 aaKnown RBP30.2■■■□□ 2.43
CPNE1-203ENST00000397442 HOXC8P31273 242 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 DNM2P50570 870 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 KRT31Q15323 416 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 NFIL3Q16649 462 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 LHX8Q68G74 356 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 DEPTORQ8TB45 409 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 MRFAP1L1Q96HT8 127 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 CEP63Q96MT8 703 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 PPP1R9BQ96SB3 815 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 AGPAT3Q9NRZ7 376 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 FRMPD3Q5JV73 1810 aa30.2■■■□□ 2.43
CPNE1-203ENST00000397442 ZEB2O60315 1214 aa30.2■■■□□ 2.42
CPNE1-203ENST00000397442 NR3C1P04150 777 aa30.2■■■□□ 2.42
CPNE1-203ENST00000397442 NR2F2P24468 414 aa30.2■■■□□ 2.42
CPNE1-203ENST00000397442 ADAM9Q13443 819 aa30.2■■■□□ 2.42
CPNE1-203ENST00000397442 KCNA10Q16322 511 aa30.2■■■□□ 2.42
CPNE1-203ENST00000397442 RHPN2Q8IUC4 686 aa30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms