RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 EFCAB8A8MWE9 144 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 KIF4AO95239 1232 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 CLCN3P51790 818 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 BACE1P56817 501 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 KIF22Q14807 665 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 ANKRD36BP1Q96IX9 119 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 CCDC77Q9BR77 488 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 MXRA8Q9BRK3 442 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 CBWD1Q9BRT8 395 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 MIS12Q9H081 205 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 RBAKQ9NYW8 714 aaPredicted RBP12.04□□□□□ -0.48
IFT140-202ENST00000397417 CPA4Q9UI42 421 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 HPSEQ9Y251 543 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 STAM2O75886 525 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 RHOBTB3O94955 611 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 SERPING1P05155 500 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 TFDP1Q14186 410 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 PDIA5Q14554 519 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 WDR72Q3MJ13 1102 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 C10orf67Q8IYJ2 551 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 GPR161Q8N6U8 529 aaKnown RBP12.04□□□□□ -0.48
IFT140-202ENST00000397417 GIMAP8Q8ND71 665 aaPredicted RBP12.04□□□□□ -0.48
IFT140-202ENST00000397417 SLC16A10Q8TF71 515 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 PANX2Q96RD6 677 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 PRDM4Q9UKN5 801 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 TMX2Q9Y320 296 aa12.04□□□□□ -0.48
IFT140-202ENST00000397417 NDUFAB1O14561 156 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 GRAP2O75791 330 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 RNF8O76064 485 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 FTLP02792 175 aaPredicted RBP12.03□□□□□ -0.48
IFT140-202ENST00000397417 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 JAK3P52333 1124 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 ZBTB16Q05516 673 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 RINT1Q6NUQ1 792 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 RSRC2Q7L4I2 434 aaKnown RBP12.03□□□□□ -0.48
IFT140-202ENST00000397417 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 SYCE1Q8N0S2 351 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 FERMT1Q9BQL6 677 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 PNMA3Q9UL41 463 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 FAM169AQ9Y6X4 670 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 POC1B-GALNT4F8VUJ3 575 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 TLR3O15455 904 aaKnown RBP12.03□□□□□ -0.48
IFT140-202ENST00000397417 CTNND1O60716 968 aaKnown RBP12.03□□□□□ -0.48
IFT140-202ENST00000397417 BMP6P22004 513 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 LPAR1Q92633 364 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 CLMNQ96JQ2 1002 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 RIOX1Q9H6W3 641 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 CNOT8Q9UFF9 292 aaKnown RBP12.03□□□□□ -0.48
IFT140-202ENST00000397417 NFU1Q9UMS0 254 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 MRPL42Q9Y6G3 142 aaKnown RBP12.03□□□□□ -0.48
IFT140-202ENST00000397417 CNTRLQ7Z7A1 2325 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 H7C0C1 242 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 RPA1P27694 616 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 ATP5OP48047 213 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 BFSP1Q12934 665 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 PAK2Q13177 524 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 AMHR2Q16671 573 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 WHAMMP3Q1A5X7 153 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 MCPH1Q8NEM0 835 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 EFCC1Q9HA90 598 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 ABCB6Q9NP58 842 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
IFT140-202ENST00000397417 AGO2Q9UKV8 859 aaKnown RBP12.03□□□□□ -0.48
IFT140-202ENST00000397417 A0A0U1RQJ8 604 aa12.02□□□□□ -0.48
IFT140-202ENST00000397417 PI4K2BG5E9Z4 385 aa12.02□□□□□ -0.48
IFT140-202ENST00000397417 WEE2P0C1S8 567 aa12.02□□□□□ -0.48
IFT140-202ENST00000397417 MAN1A1P33908 653 aa12.02□□□□□ -0.48
IFT140-202ENST00000397417 NR1I3Q14994 352 aa12.02□□□□□ -0.48
IFT140-202ENST00000397417 CBWD2Q8IUF1 395 aa12.02□□□□□ -0.48
IFT140-202ENST00000397417 ABI1Q8IZP0 508 aa12.02□□□□□ -0.48
IFT140-202ENST00000397417 FAM193BQ96PV7 902 aaPredicted RBP12.02□□□□□ -0.48
IFT140-202ENST00000397417 MORC2Q9Y6X9 1032 aaPredicted RBP12.02□□□□□ -0.48
IFT140-202ENST00000397417 A0A1B0GTH6 734 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 GOLGA8MH3BSY2 632 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 N4BP1O75113 896 aaKnown RBP12.02□□□□□ -0.49
IFT140-202ENST00000397417 CACNB2Q08289 660 aaPredicted RBP12.02□□□□□ -0.49
IFT140-202ENST00000397417 LY6KQ17RY6 165 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 TKFCQ3LXA3 575 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 NAALADL2Q58DX5 795 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 INTS8Q75QN2 995 aaKnown RBP12.02□□□□□ -0.49
IFT140-202ENST00000397417 CCNYQ8ND76 341 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 CPA5Q8WXQ8 436 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 TOPORSQ9NS56 1045 aaPredicted RBP12.02□□□□□ -0.49
IFT140-202ENST00000397417 RAB20Q9NX57 234 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 ADAM22Q9P0K1 906 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 SNX24Q9Y343 169 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 MAD1L1Q9Y6D9 718 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 CALCAP01258 141 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 NCAPHQ15003 741 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 HSPH1Q92598 858 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 NAP1L3Q99457 506 aaPredicted RBP12.02□□□□□ -0.49
IFT140-202ENST00000397417 INTS2Q9H0H0 1204 aaKnown RBP12.02□□□□□ -0.49
IFT140-202ENST00000397417 SEMA6BQ9H3T3 888 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 FBXO40Q9UH90 709 aa12.02□□□□□ -0.49
IFT140-202ENST00000397417 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms