RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 MARSP56192 900 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 CACNB2Q08289 660 aaPredicted RBP20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 KCNJ12Q14500 433 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 LRRC41Q15345 812 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 TMEM63BQ5T3F8 832 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 TRMT1LQ7Z2T5 733 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 MAP4K3Q8IVH8 894 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 TMEM161BQ8NDZ6 487 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 MKNK1Q9BUB5 465 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 NFKBIZQ9BYH8 718 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 TMEM134Q9H6X4 195 aa20.92■□□□□ 0.94
TSPAN4-204ENST00000397404 TRIM49BA6NDI0 452 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 CCDC169A6NNP5 214 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 ADCY6O43306 1168 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 ECM2O94769 699 aaPredicted RBP20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 PRKAR2AP13861 404 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 INSRRP14616 1297 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 NMT1P30419 496 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 CASP5P51878 434 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 PMS1P54277 932 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 MAEAQ7L5Y9 396 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 SYCP3Q8IZU3 236 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 PCSK9Q8NBP7 692 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 RNPEPQ9H4A4 650 aa20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 METTL14Q9HCE5 456 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-204ENST00000397404 A0A1B0GTH6 734 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 HAS3O00219 553 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 PRPF6O94906 941 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 C1QTNF8P60827 252 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 PPFIA1Q13136 1202 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 ADAM9Q13443 819 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 HS1BP3Q53T59 392 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 TRPV1Q8NER1 839 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 SH2D3AQ9BRG2 576 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 IMPACTQ9P2X3 320 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 TBX20Q9UMR3 447 aa20.9■□□□□ 0.94
TSPAN4-204ENST00000397404 MAPK13O15264 365 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 CABYRO75952 493 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 C22orf31O95567 290 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 ZNF286BP0CG31 522 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 ATP1A3P13637 1013 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 STRN3Q13033 797 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 PCBP1Q15365 356 aaKnown RBP eCLIP20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 LRRC55Q6ZSA7 311 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 FRMD5Q7Z6J6 570 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 ZBTB8OSQ8IWT0 167 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 NELFCDQ8IXH7 590 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 DEPTORQ8TB45 409 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 MTG1Q9BT17 334 aaPredicted RBP20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 GPRC5CQ9NQ84 441 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 IFNKQ9P0W0 207 aa20.89■□□□□ 0.94
TSPAN4-204ENST00000397404 ZSWIM8A7E2V4 1837 aa20.89■□□□□ 0.93
TSPAN4-204ENST00000397404 GLRA2P23416 452 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 NR2F2P24468 414 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 CNGA1P29973 690 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 HTRA3P83110 453 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 ENPEPQ07075 957 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 GRIK4Q16099 956 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 GLIS3Q8NEA6 775 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 IQCDQ96DY2 449 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 MAP7D2Q96T17 732 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 SEZ6LQ9BYH1 1024 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 FGFBP2Q9BYJ0 223 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 WBP1LQ9NX94 342 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 DENND3A2RUS2 1198 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 SLC16A4O15374 487 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 NR3C1P04150 777 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 C6orf222P0C671 652 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 HOXD13P35453 343 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 PSEN2P49810 448 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 PURAQ00577 322 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 MFSD10Q14728 455 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 KIAA0753Q2KHM9 967 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 CDCA2Q69YH5 1023 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 EFCAB12Q6NXP0 572 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 RNF180Q86T96 592 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 LINC01465Q8N7H1 131 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 CNOT6LQ96LI5 555 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 XPO4Q9C0E2 1151 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 XPNPEP3Q9NQH7 507 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 SUCLA2Q9P2R7 463 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 DDX20Q9UHI6 824 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 FRMD4BQ9Y2L6 1034 aa20.88■□□□□ 0.93
TSPAN4-204ENST00000397404 KAT6AQ92794 2004 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 K7ERI5 159 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 TGFB1I1O43294 461 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 PIGRP01833 764 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 EPB41P11171 864 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 KLRC1P26715 233 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 GRK4P32298 578 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 NR1I3Q14994 352 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 KRT31Q15323 416 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 ZC2HC1CQ53FD0 456 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 GNASQ5JWF2 1037 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 SLFN12LQ6IEE8 588 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 MTHFD1LQ6UB35 978 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 ZNF410Q86VK4 478 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 IFNLR1Q8IU57 520 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 IRF2BP1Q8IU81 584 aa20.87■□□□□ 0.93
TSPAN4-204ENST00000397404 PRPF31Q8WWY3 499 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms