RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 NSRP1Q9H0G5 558 aaKnown RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 ABCF3Q9NUQ8 709 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 INTUQ9ULD6 942 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 PCDHB13Q9Y5F0 798 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 POTEFA5A3E0 1075 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 AKAP3O75969 853 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 NUDT17P0C025 328 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 POTEIP0CG38 1075 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 MMP13P45452 471 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 CTCFP49711 727 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 TUBP50607 506 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 ICA1Q05084 483 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 PPP2R5EQ16537 467 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 KIAA1755Q5JYT7 1200 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SPDYCQ5MJ68 293 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 DUPD1Q68J44 220 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 POTEGQ6S5H5 508 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 POTEEQ6S8J3 1075 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SMIM5Q71RC9 77 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 KRT27Q7Z3Y8 459 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SFR1Q86XK3 245 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 RNF25Q96BH1 459 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 PGM2Q96G03 612 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 NOP53Q9NZM5 478 aaKnown RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 RASAL2Q9UJF2 1139 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SLC12A4Q9UP95 1085 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 TRIM33Q9UPN9 1127 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SNED1Q8TER0 1413 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 SPDYE5A6NIY4 337 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 SMIM24O75264 130 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 RANBP1P43487 201 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 ALDH5A1P51649 535 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 PABPC4Q13310 644 aaKnown RBP eCLIP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 ZC3H12AQ5D1E8 599 aaKnown RBP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 HYIQ5T013 277 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 TBC1D9BQ66K14 1250 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 PIGWQ7Z7B1 504 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 JAMLQ86YT9 394 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 DYDC1Q8WWB3 177 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 RFFLQ8WZ73 363 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 DHX36Q9H2U1 1008 aaKnown RBP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 EPB41L4BQ9H329 900 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 ERVK-5Q9HDB9 667 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 ZDHHC18Q9NUE0 388 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 MYH7BA7E2Y1 1941 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 CFAP73A6NFT4 308 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 FAM187AA6NFU0 413 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 MEIS1O00470 390 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 CLIC2O15247 247 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 MED24O75448 989 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 CASP4P49662 377 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 ARSHQ5FYA8 562 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 C6orf118Q5T5N4 469 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 DCAF12L1Q5VU92 463 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 SLC30A9Q6PML9 568 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 NBPF5PQ86XG9 351 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 LNX1Q8TBB1 728 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 METTL14Q9HCE5 456 aaKnown RBP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 TTC7AQ9ULT0 858 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-206ENST00000397163 NENFQ9UMX5 172 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 TRAF3IP3Q9Y228 551 aa9.9□□□□□ -0.82
CAPN3-206ENST00000397163 PNMA6FA0A0J9YX94 578 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.83
CAPN3-206ENST00000397163 NR3C1P04150 777 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 LMNB1P20700 586 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 RPL13P26373 211 aaKnown RBP9.9□□□□□ -0.83
CAPN3-206ENST00000397163 JAM2P57087 298 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 KLRC3Q07444 240 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 SLC10A5Q5PT55 438 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 CLEC10AQ8IUN9 316 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 MARCH10Q8NA82 808 aaPredicted RBP9.9□□□□□ -0.83
CAPN3-206ENST00000397163 SLC17A8Q8NDX2 589 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 L3MBTL3Q96JM7 780 aaPredicted RBP9.9□□□□□ -0.83
CAPN3-206ENST00000397163 CARD9Q9H257 536 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 ADAM7Q9H2U9 754 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 SEMA4AQ9H3S1 761 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 PSTPIP2Q9H939 334 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 SIX2Q9NPC8 291 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 BATF3Q9NR55 127 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 TMOD4Q9NZQ9 345 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 MTRF1LQ9UGC7 380 aaKnown RBP9.9□□□□□ -0.83
CAPN3-206ENST00000397163 DIS3Q9Y2L1 958 aaKnown RBP9.9□□□□□ -0.83
CAPN3-206ENST00000397163 MYH4Q9Y623 1939 aa9.9□□□□□ -0.83
CAPN3-206ENST00000397163 AGTP01019 485 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 SLC16A2P36021 539 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 SLC12A3P55017 1021 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 MAPK7Q13164 816 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 PLS1Q14651 629 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 CCDC38Q502W7 563 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 MGARPQ8TDB4 240 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 EPS8L3Q8TE67 593 aaKnown RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 ITFG2Q969R8 447 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 SLC35C1Q96A29 364 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 GPR101Q96P66 508 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 RTFDC1Q9BY42 306 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-206ENST00000397163 JMJD4Q9H9V9 463 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 PICK1Q9NRD5 415 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 SLC5A4Q9NY91 659 aa9.89□□□□□ -0.83
CAPN3-206ENST00000397163 PITPNM2Q9BZ72 1349 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms