RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 USP17L13C9JLJ4 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L11C9JVI0 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L18D6R9N7 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L22D6RA61 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L17D6RBQ6 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L19D6RCP7 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L20D6RJB6 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 TFRCP02786 760 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 PLCG1P19174 1290 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 PSMA3P25788 255 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SFNP31947 248 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ADD2P35612 726 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 GRIK1P39086 918 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L24Q0WX57 530 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ARHGEF7Q14155 803 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 GLB1LQ6UWU2 654 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 PPP4R3CPQ6ZMV5 832 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ACAD11Q709F0 780 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 GLYCTKQ8IVS8 523 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SMAP1Q8IYB5 467 aaPredicted RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 TUBB6Q9BUF5 446 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 TRPV6Q9H1D0 765 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 MAN1C1Q9NR34 630 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 BSDC1Q9NW68 430 aaPredicted RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 SH3BP1Q9Y3L3 701 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 RNF123Q5XPI4 1314 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 WDR62O43379 1518 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 DUOX2Q9NRD8 1548 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 GOLGA8MH3BSY2 632 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 TCF3P15923 654 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 EPB42P16452 691 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SLC8A1P32418 973 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 GCKP35557 465 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 BCAR1P56945 870 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 PSMC1P62191 440 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 KRT17Q04695 432 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 NR5A1Q13285 461 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 IRAK1BP1Q5VVH5 260 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 HIPK4Q8NE63 616 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 NEK9Q8TD19 979 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 TTC17Q96AE7 1141 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 C11orf70Q9BRQ4 267 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 TRIM55Q9BYV6 548 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ELP3Q9H9T3 547 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 LATS2Q9NRM7 1088 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 SLC16A4O15374 487 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 APOA4P06727 396 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 GSPT1P15170 499 aaKnown RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 AARSP49588 968 aaKnown RBP eCLIP7.65□□□□□ -1.187e-6■□□□□ 11.2
UPF2-203ENST00000397053 ATXN3P54252 364 aaPredicted RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 COPS2P61201 443 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 PDCLQ13371 301 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 PKN3Q6P5Z2 889 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 ARHGEF25Q86VW2 580 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 PASD1Q8IV76 773 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 PBKQ96KB5 322 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 GLT1D1Q96MS3 346 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 DHX35Q9H5Z1 703 aaKnown RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 ZSWIM6Q9HCJ5 1215 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 ADAMTS1Q9UHI8 967 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 CFAP99D6REC4 459 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 ARIH2O95376 493 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 IFNAR1P17181 557 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 GCLMP48507 274 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 HMGCS2P54868 508 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 SKOR1P84550 965 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 MTFR1Q15390 333 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 CCDC85BQ15834 202 aaPredicted RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 ZNF658Q5TYW1 1059 aaPredicted RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 PI16Q6UXB8 463 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 PARK7Q99497 189 aaKnown RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 CYP26B1Q9NR63 512 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 RNF14Q9UBS8 474 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 TMEM2Q9UHN6 1383 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 A0A1W2PQ27 194 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 A0A1W2PQ64 194 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 A0A1W2PQD8 194 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 TARSL2A2RTX5 802 aaKnown RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 ZBTB5O15062 677 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 SEC24BO95487 1268 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 PLS3P13797 630 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 LTKP29376 864 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 HOXA7P31268 230 aaPredicted RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 QARSP47897 775 aaKnown RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 NT5C2P49902 561 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 PRELPP51888 382 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 EN1Q05925 392 aaPredicted RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 LRRC74AQ0VAA2 488 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 NBPF20Q3BBV1 942 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 TBC1D9BQ66K14 1250 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 TRIM48Q8IWZ4 208 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 TRIML2Q8N7C3 387 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 STN1Q9H668 368 aaKnown RBP7.65□□□□□ -1.18
UPF2-203ENST00000397053 MED4Q9NPJ6 270 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 KIF17Q9P2E2 1029 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 MAP10Q9P2G4 905 aa7.65□□□□□ -1.18
UPF2-203ENST00000397053 SNX5Q9Y5X3 404 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms