RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 AKT3Q9Y243 479 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CACNA1BQ00975 2339 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 OTOGLQ3ZCN5 2332 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CCDC69A6NI79 296 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 LILRB3O75022 631 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 N4BP1O75113 896 aaKnown RBP9.56□□□□□ -0.88
SCFD1-202ENST00000396629 GALTP07902 379 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CFHP08603 1231 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 SP9P0CG40 484 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 RXRAP19793 462 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 TMOD1P28289 359 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CLK2P49760 499 aaKnown RBP9.56□□□□□ -0.88
SCFD1-202ENST00000396629 AAMPQ13685 434 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 WWC2Q6AWC2 1192 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 PHLDB3Q6NSJ2 640 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 TYW1BQ6NUM6 668 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF746Q6NUN9 644 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-202ENST00000396629 PPP1R18Q6NYC8 613 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 ZC3H14Q6PJT7 736 aaKnown RBP9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CASC1Q6TDU7 716 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 RUFY2Q8WXA3 655 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 RIN2Q8WYP3 895 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-202ENST00000396629 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CNTNAP3BQ96NU0 1288 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 MAP7D2Q96T17 732 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 VN1R3Q9BXE9 311 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 RHOBTB2Q9BYZ6 727 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CNTNAP3Q9BZ76 1288 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 DACT1Q9NYF0 836 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 MIA3Q5JRA6 1907 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 IGLV3-22A0A075B6J6 115 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 STK25O00506 426 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 PRC1O43663 620 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 ZC3H11AO75152 810 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCFD1-202ENST00000396629 IGHDP01880 384 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF76P36508 570 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 LIFRP42702 1097 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 GPC3P51654 580 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 AP3B2Q13367 1082 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 NONOQ15233 471 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CYP26C1Q6V0L0 522 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 NFXL1Q6ZNB6 911 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 PLA2G4DQ86XP0 818 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 SLC44A3Q8N4M1 653 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CCDC82Q8N4S0 544 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 NXPE3Q969Y0 559 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 TBC1D17Q9HA65 648 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 CHST12Q9NRB3 414 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 EPS15L1Q9UBC2 864 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 STK39Q9UEW8 545 aa9.56□□□□□ -0.88
SCFD1-202ENST00000396629 PATJQ8NI35 1801 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 FAM86B1E9PN63 330 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 IPO5O00410 1097 aaKnown RBP9.55□□□□□ -0.88
SCFD1-202ENST00000396629 PSAPP07602 524 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 CYP3A4P08684 503 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 FAM86B2P0C5J1 330 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 SRFP11831 508 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 FGFR4P22455 802 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 CHMLP26374 656 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 PHKA2P46019 1235 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 RSPO4Q2I0M5 234 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-202ENST00000396629 SMAP1Q8IYB5 467 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-202ENST00000396629 LRRC71Q8N4P6 559 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 DCLK2Q8N568 766 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 FANCBQ8NB91 859 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 SUMF1Q8NBK3 374 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 CRYGNQ8WXF5 182 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 RSAD2Q8WXG1 361 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 MAP4K1Q92918 833 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 BORCS6Q96GS4 357 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 WDR6Q9NNW5 1121 aaKnown RBP9.55□□□□□ -0.88
SCFD1-202ENST00000396629 TBC1D22BQ9NU19 505 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 TBC1D13Q9NVG8 400 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 CA14Q9ULX7 337 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 DNAH14Q0VDD8 3507 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 PAPLNO95428 1278 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 CNPP09543 421 aaKnown RBP9.55□□□□□ -0.88
SCFD1-202ENST00000396629 GSPT1P15170 499 aaKnown RBP9.55□□□□□ -0.88
SCFD1-202ENST00000396629 KLRC2P26717 231 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 MCM5P33992 734 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 SLC11A1P49279 550 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 ADCY7P51828 1080 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 NAPAP54920 295 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 NOMO2Q5JPE7 1267 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF668Q96K58 619 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-202ENST00000396629 HINFPQ9BQA5 517 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 GABBR1Q9UBS5 961 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 SIT1Q9Y3P8 196 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 PCDHA10Q9Y5I2 948 aa9.55□□□□□ -0.88
SCFD1-202ENST00000396629 CACNA1IQ9P0X4 2223 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 CNTNAP5Q8WYK1 1306 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 SMCO2A6NFE2 343 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 SPDYE4A6NLX3 237 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 SGSM2O43147 1006 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF623O75123 536 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 OFD1O75665 1012 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms