RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 N4BP1O75113 896 aaKnown RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 FAM228BP0C875 321 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 SMTNP53814 917 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 ACTR2P61160 394 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 STXBP2Q15833 593 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 DLK2Q6UY11 383 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 ANKRD35Q8N283 1001 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 CEP170P1Q96L14 293 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 PARD6BQ9BYG5 372 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 INTS2Q9H0H0 1204 aaKnown RBP16.31■□□□□ 0.2
CBX3-202ENST00000396386 IGSF9BQ9UPX0 1349 aa16.31■□□□□ 0.2
CBX3-202ENST00000396386 SIP14410 1827 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 MAPK13O15264 365 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 ATP8B3O60423 1300 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 FERP16591 822 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 STAT1P42224 750 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 PRKCEQ02156 737 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 SP4Q02446 784 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 PTK2Q05397 1052 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 CBWD6Q4V339 395 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 CBWD3Q5JTY5 395 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 CBWD5Q5RIA9 395 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 C10orf76Q5T2E6 689 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 MIS18BP1Q6P0N0 1132 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 VPS36Q86VN1 386 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 FMNL3Q8IVF7 1028 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 XXYLT1Q8NBI6 393 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 MCPH1Q8NEM0 835 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 RPGRIP1Q96KN7 1286 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 CBWD1Q9BRT8 395 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 C17orf75Q9HAS0 396 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 HSPBP1Q9NZL4 362 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 SEPT9Q9UHD8 586 aaPredicted RBP16.3■□□□□ 0.2
CBX3-202ENST00000396386 SNX12Q9UMY4 172 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 MYH10P35580 1976 aa16.3■□□□□ 0.2
CBX3-202ENST00000396386 A0A0G2JLL6 359 aaPredicted RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 CCDC169A6NNP5 214 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 TISP43B9A030 160 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 STBD1O95210 358 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 SUPT20HL2P0C7V6 817 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 RFX1P22670 979 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ICAM3P32942 547 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 NF2P35240 595 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ALDH5A1P51649 535 aaPredicted RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 PPATQ06203 517 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ABHD15Q6UXT9 468 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ZNF571Q7Z3V5 609 aaPredicted RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 PRRT2Q7Z6L0 340 aaPredicted RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 CCDC60Q8IWA6 550 aaPredicted RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 CAGE1Q8TC20 777 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ANKZF1Q9H8Y5 726 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ELP3Q9H9T3 547 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ADAMTS1Q9UHI8 967 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 DGAT1O75907 488 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 NPTX2P47972 431 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 VAMP7P51809 220 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 BRD3Q15059 726 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 NAB2Q15742 525 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ERO1BQ86YB8 467 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 MAP4K3Q8IVH8 894 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 ZNF784Q8NCA9 323 aaPredicted RBP16.29■□□□□ 0.2
CBX3-202ENST00000396386 TMEM161BQ8NDZ6 487 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 SPIRE2Q8WWL2 714 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 CAPZA3Q96KX2 299 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 KMT5AQ9NQR1 393 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 TBX20Q9UMR3 447 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 HYOU1Q9Y4L1 999 aa16.29■□□□□ 0.2
CBX3-202ENST00000396386 CCDC151A5D8V7 595 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 F8VZ95 297 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 P4HA2O15460 535 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 SOX5P35711 763 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
CBX3-202ENST00000396386 KIAA0753Q2KHM9 967 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 STK33Q9BYT3 514 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 ATP6V0A4Q9HBG4 840 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 APEX2Q9UBZ4 518 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 SALL4Q9UJQ4 1053 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 DNAJC12Q9UKB3 198 aa16.28■□□□□ 0.2
CBX3-202ENST00000396386 EMSYQ7Z589 1322 aa16.27■□□□□ 0.2
CBX3-202ENST00000396386 BTNL10A8MVZ5 291 aa16.27■□□□□ 0.2
CBX3-202ENST00000396386 BUB1O43683 1085 aa16.27■□□□□ 0.2
CBX3-202ENST00000396386 ZRANB2O95218 330 aaKnown RBP eCLIP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms