RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SMIM10L2BP0DMW5 78 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
VAMP1-202ENST00000396308 NPTX2P47972 431 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 LBX1P52954 281 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 STRN3Q13033 797 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 CENPPQ6IPU0 288 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 EFCAB12Q6NXP0 572 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 HAUS6Q7Z4H7 955 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 ZNF507Q8TCN5 953 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 C2orf40Q9H1Z8 148 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 THAP9Q9H5L6 903 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 POLD4Q9HCU8 107 aa16.96■□□□□ 0.31
VAMP1-202ENST00000396308 TYW1Q9NV66 732 aaKnown RBP16.96■□□□□ 0.31
VAMP1-202ENST00000396308 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.31
VAMP1-202ENST00000396308 TRIM49BA6NDI0 452 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 ZBTB42B2RXF5 422 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 PDXKO00764 312 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 CBFA2T2O43439 604 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 ADAMTS4O75173 837 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
VAMP1-202ENST00000396308 SERPINC1P01008 464 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 KLRC1P26715 233 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 ARL2P36404 184 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 CASP5P51878 434 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 EFNA5P52803 228 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 HSP90AA2PQ14568 343 aaPredicted RBP16.95■□□□□ 0.3
VAMP1-202ENST00000396308 NCAPHQ15003 741 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 EDRF1Q3B7T1 1238 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 TTI2Q6NXR4 508 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 MTHFD1LQ6UB35 978 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 LRRC71Q8N4P6 559 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 ARRDC4Q8NCT1 418 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 TRAPPC12Q8WVT3 735 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 SCLT1Q96NL6 688 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 TRIM5Q9C035 493 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.95■□□□□ 0.3
VAMP1-202ENST00000396308 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
VAMP1-202ENST00000396308 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 SCN10AQ9Y5Y9 1956 aa16.95■□□□□ 0.3
VAMP1-202ENST00000396308 IGKV6-21A0A0C4DH24 114 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 C17orf102A2RUQ5 167 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 DENND3A2RUS2 1198 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 KBTBD13C9JR72 458 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 HAS3O00219 553 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 SOX10P56693 466 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
VAMP1-202ENST00000396308 CDC42EP1Q00587 391 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 FKBP3Q00688 224 aaKnown RBP16.94■□□□□ 0.3
VAMP1-202ENST00000396308 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 ANKRD40Q6AI12 368 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
VAMP1-202ENST00000396308 GLIS3Q8NEA6 775 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 KAT2BQ92831 832 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 BICD1Q96G01 975 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 CTAGE1Q96RT6 745 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 NTPCRQ9BSD7 190 aaKnown RBP16.94■□□□□ 0.3
VAMP1-202ENST00000396308 FGFBP2Q9BYJ0 223 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 SEMA6BQ9H3T3 888 aa16.94■□□□□ 0.3
VAMP1-202ENST00000396308 MYADML2A6NDP7 307 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 MOXD2PA6NHM9 499 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 CETN3O15182 167 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 GNA14O95837 355 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 RPLP2P05387 115 aaKnown RBP16.93■□□□□ 0.3
VAMP1-202ENST00000396308 GLRA2P23416 452 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 EEF1GP26641 437 aaKnown RBP16.93■□□□□ 0.3
VAMP1-202ENST00000396308 PHKA2P46019 1235 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 CLCN3P51790 818 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 GTF2BQ00403 316 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 LAMTOR4Q0VGL1 99 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 ZC2HC1CQ53FD0 456 aaPredicted RBP16.93■□□□□ 0.3
VAMP1-202ENST00000396308 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 SARM1Q6SZW1 724 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 RHPN2Q8IUC4 686 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 TMEM161BQ8NDZ6 487 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 ASAP3Q8TDY4 903 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 SH3TC2Q8TF17 1288 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 LMBR1Q8WVP7 490 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
VAMP1-202ENST00000396308 CEP63Q96MT8 703 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 TSEN34Q9BSV6 310 aaKnown RBP16.93■□□□□ 0.3
VAMP1-202ENST00000396308 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
VAMP1-202ENST00000396308 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
VAMP1-202ENST00000396308 KCNJ18B7U540 433 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 K7ERI5 159 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 PPP1R37O75864 691 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 ASGR1P07306 291 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 HSPA8P11142 646 aaKnown RBP16.92■□□□□ 0.3
VAMP1-202ENST00000396308 CAPSQ13938 189 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 KCNJ12Q14500 433 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 KCNA10Q16322 511 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 PKN2Q16513 984 aaKnown RBP16.92■□□□□ 0.3
VAMP1-202ENST00000396308 CCDC40Q4G0X9 1142 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 FAM47CQ5HY64 1035 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 CDKAL1Q5VV42 579 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 CXCL17Q6UXB2 119 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 CREBRFQ8IUR6 639 aa16.92■□□□□ 0.3
VAMP1-202ENST00000396308 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms