RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 NR3C1P04150 777 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 PYGBP11216 843 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 EEF1B2P24534 225 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 LRRC37BQ96QE4 947 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TRIM4Q9C037 500 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ALDH8A1Q9H2A2 487 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 MAP3K20Q9NYL2 800 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 CNOT8Q9UFF9 292 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 STAP1Q9ULZ2 295 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 MAGED2Q9UNF1 606 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ADGRB3O60242 1522 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ZNF335Q9H4Z2 1342 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ANO9A1A5B4 782 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 DENND3A2RUS2 1198 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 LGALS16A8MUM7 142 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 PALMO75781 387 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ACSL3O95573 720 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 FCER1AP12319 257 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ALX1Q15699 326 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 NBPF9Q3BBW0 867 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 FASTKD5Q7L8L6 764 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ENAHQ8N8S7 591 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 GDAP1Q8TB36 358 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 RAD54LQ92698 747 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 CENPKQ9BS16 269 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 EDEM3Q9BZQ6 932 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 KDM4CQ9H3R0 1056 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ZNF302Q9NR11 478 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ASAP2O43150 1006 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 MORF4L2Q15014 288 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ACAD11Q709F0 780 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 AP1M1Q9BXS5 423 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 C21orf2O43822 256 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 PRCPP42785 496 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 CTTNQ14247 550 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 PPP6R3Q5H9R7 873 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 HEATR6Q6AI08 1181 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TMEM47Q9BQJ4 181 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 KIFC3Q9BVG8 833 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 PIH1D3Q9NQM4 214 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 MRGBPQ9NV56 204 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 DNAJC12Q9UKB3 198 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 A0A087WUV0 522 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 GYG2O15488 501 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 SLC4A1P02730 911 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 HLFQ16534 295 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ADGRF4Q8IZF3 695 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 WRNIP1Q96S55 665 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 FTOQ9C0B1 505 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 BAZ2BQ9UIF8 2168 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 HSPA4LO95757 839 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 STAT3P40763 770 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 MDM2Q00987 491 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 YWHAHQ04917 246 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 FAM83BQ5T0W9 1011 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TMEM270Q6UE05 265 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 SCARA5Q6ZMJ2 495 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 NOP9Q86U38 636 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ZBTB18Q99592 522 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 HINFPQ9BQA5 517 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TUFT1Q9NNX1 390 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 NOVA2Q9UNW9 492 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 ZHX2Q9Y6X8 837 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 RPSAP08865 295 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 NUDT18Q6ZVK8 323 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 FRMD5Q7Z6J6 570 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 RHPN2Q8IUC4 686 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TMEM60Q9H2L4 133 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 NFU1Q9UMS0 254 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 HEY1Q9Y5J3 304 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 MADDQ8WXG6 1647 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 A0A1W2PQC6 194 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 E5RI56 91 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PYGLP06737 847 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 MMEP08473 750 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PADI6Q6TGC4 694 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SGMS1Q86VZ5 419 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 GUF1Q8N442 669 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 EML4Q9HC35 981 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 NDE1Q9NXR1 346 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 RRP15Q9Y3B9 282 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 FIS1Q9Y3D6 152 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 ABCA6Q8N139 1617 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PRAMEF22A3QJZ6 481 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 KIAA0391O15091 583 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 IMPG1Q17R60 797 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 GAS2L3Q86XJ1 694 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SIRT2Q8IXJ6 389 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 KCTD17Q8N5Z5 321 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 DDX50Q9BQ39 737 aaKnown RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 PRDX5P30044 214 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 CHRNA3P32297 505 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 ARPP19P56211 112 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SEPT12Q8IYM1 358 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SH3TC2Q8TF17 1288 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 GRAMD1AQ96CP6 724 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TRIM54Q9BYV2 358 aa5.81□□□□□ -1.48
VPS13C-204ENST00000395898 TAF1DQ9H5J8 278 aaPredicted RBP5.81□□□□□ -1.48
VPS13C-204ENST00000395898 SLITRK6Q9H5Y7 841 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms