RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 MAFO75444 373 aaPredicted RBP12.36□□□□□ -0.43
TOM1-202ENST00000395736 CSDE1O75534 798 aaKnown RBP12.36□□□□□ -0.43
TOM1-202ENST00000395736 ATF7P17544 494 aaPredicted RBP12.36□□□□□ -0.43
TOM1-202ENST00000395736 TMOD1P28289 359 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.43
TOM1-202ENST00000395736 LTBRP36941 435 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 NPEPPSP55786 919 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 PSMC5P62195 406 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 HYAL1Q12794 435 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 FAM43BQ6ZT52 329 aaPredicted RBP12.36□□□□□ -0.43
TOM1-202ENST00000395736 DIS3L2Q8IYB7 885 aaKnown RBP12.36□□□□□ -0.43
TOM1-202ENST00000395736 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 SPPL3Q8TCT6 385 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 PABPC5Q96DU9 382 aaKnown RBP12.36□□□□□ -0.43
TOM1-202ENST00000395736 CWH43Q9H720 699 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 TMEM161AQ9NX61 479 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 MUTYHQ9UIF7 546 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 PCDHB7Q9Y5E2 793 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
TOM1-202ENST00000395736 ZNF292O60281 2723 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 A0A087WZ62 844 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 TBKBP1A7MCY6 615 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 DDX11L8A8MPP1 907 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 H3BQ06 376 aaPredicted RBP12.35□□□□□ -0.43
TOM1-202ENST00000395736 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
TOM1-202ENST00000395736 CTC1Q2NKJ3 1217 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 ASCL5Q7RTU5 278 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 ADGRD2Q7Z7M1 963 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 KSR1Q8IVT5 923 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 NLRP7Q8WX94 980 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 FDXACB1Q9BRP7 624 aaPredicted RBP12.35□□□□□ -0.43
TOM1-202ENST00000395736 LXNQ9BS40 222 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 ELAC1Q9H777 363 aaKnown RBP12.35□□□□□ -0.43
TOM1-202ENST00000395736 CYP26B1Q9NR63 512 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 PCDHGC5Q9Y5F6 944 aa12.35□□□□□ -0.43
TOM1-202ENST00000395736 ZBTB39O15060 712 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 LINC01565O15544 149 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 TBX10O75333 385 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 EPHA7Q15375 998 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 NAALADL2Q58DX5 795 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 CLLU1OSQ5K130 101 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 NCAPH2Q6IBW4 605 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 LRRC55Q6ZSA7 311 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 ZNF598Q86UK7 904 aaKnown RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 ECHDC2Q86YB7 292 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 POF1BQ8WVV4 589 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 DYDC2Q96IM9 177 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 CASD1Q96PB1 797 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 NAP1L4Q99733 375 aaKnown RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 DHX33Q9H6R0 707 aaKnown RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 ATP6V0A4Q9HBG4 840 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 BRMS1Q9HCU9 246 aa12.34□□□□□ -0.43
TOM1-202ENST00000395736 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 TYW1Q9NV66 732 aaKnown RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 SUCLA2Q9P2R7 463 aaPredicted RBP12.34□□□□□ -0.43
TOM1-202ENST00000395736 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
TOM1-202ENST00000395736 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 CYP4A11Q02928 519 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.44
TOM1-202ENST00000395736 HERC4Q5GLZ8 1057 aaPredicted RBP12.33□□□□□ -0.44
TOM1-202ENST00000395736 BMP8AQ7Z5Y6 402 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 RHPN2Q8IUC4 686 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 C4orf19Q8IY42 314 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 CEP170P1Q96L14 293 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 MTMR9Q96QG7 549 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 IFT122Q9HBG6 1241 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 CLDND1Q9NY35 253 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
TOM1-202ENST00000395736 GVINP1Q7Z2Y8 2422 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 A0A0U1RQF3 1178 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 NEMFO60524 1076 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 SLITRK3O94933 977 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 ZSCAN20P17040 1043 aaPredicted RBP12.32□□□□□ -0.44
TOM1-202ENST00000395736 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
TOM1-202ENST00000395736 PBX3P40426 434 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 CALCRLQ16602 461 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 ZNF410Q86VK4 478 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 ADHFE1Q8IWW8 467 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 SLFN12Q8IYM2 578 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 TMEM143Q96AN5 459 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 NLRP4Q96MN2 994 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 GCOM2Q9BZD3 368 aaPredicted RBP12.32□□□□□ -0.44
TOM1-202ENST00000395736 TMEM117Q9H0C3 514 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 MINDY3Q9H8M7 445 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
TOM1-202ENST00000395736 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
TOM1-202ENST00000395736 MED19A0JLT2 244 aaPredicted RBP12.31□□□□□ -0.44
TOM1-202ENST00000395736 POTEMA6NI47 508 aa12.31□□□□□ -0.44
TOM1-202ENST00000395736 MEIS3P2A8K0S8 358 aa12.31□□□□□ -0.44
TOM1-202ENST00000395736 DKC1O60832 514 aaKnown RBP eCLIP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms