RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 RNF10Q8N5U6 811 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 KCNH5Q8NCM2 988 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SLC7A3Q8WY07 619 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SUCLG2Q96I99 432 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 VPS11Q9H270 941 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 SERHL2Q9H4I8 314 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 CYP4F12Q9HCS2 524 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 VTA1Q9NP79 307 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 APOBEC2Q9Y235 224 aaKnown RBP4.63□□□□□ -1.67
HERC4-204ENST00000395198 PCDHB9Q9Y5E1 797 aa4.63□□□□□ -1.67
HERC4-204ENST00000395198 TRIM16O95361 564 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 SERPINC1P01008 464 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ZBTB48P10074 688 aaPredicted RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 PDGFRAP16234 1089 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ZNF3P17036 446 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 HOXD13P35453 343 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ETV3P41162 512 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 DSTNP60981 165 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 FRG1Q14331 258 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 GNA13Q14344 377 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 MXD4Q14582 209 aaPredicted RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 PCBP2Q15366 365 aaKnown RBP eCLIP4.62□□□□□ -1.672e-10■□□□□ 9.6
HERC4-204ENST00000395198 TAF5Q15542 800 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 FYB2Q5VWT5 728 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 PKN3Q6P5Z2 889 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 IL27RAQ6UWB1 636 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 RGS9BPQ6ZS82 235 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 VSIG10LQ86VR7 867 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 SPATA24Q86W54 205 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 IFNL1Q8IU54 200 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 NUP93Q8N1F7 819 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 METTL21AQ8WXB1 218 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 LPIN2Q92539 896 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ZUFSPQ96AP4 578 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 RRP36Q96EU6 259 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 CCDC138Q96M89 665 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 C16orf45Q96MC5 204 aaPredicted RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 FAM20AQ96MK3 541 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TAAR9Q96RI9 348 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 SIN3AQ96ST3 1273 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 MPHOSPH9Q99550 1183 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 DDX50Q9BQ39 737 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 SDHAF3Q9NRP4 125 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 OLA1Q9NTK5 396 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 CCDC39Q9UFE4 941 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 SALL4Q9UJQ4 1053 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ITGB1BP2Q9UKP3 347 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 CARD8Q9Y2G2 431 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 C15orf41Q9Y2V0 281 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 PCDHGA2Q9Y5H1 932 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ADGRG1Q9Y653 693 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TOPBP1Q92547 1522 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 MYO3BQ8WXR4 1341 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 POTEFA5A3E0 1075 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 PGPEP1LA6NFU8 196 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 FOXO6A8MYZ6 492 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ASAP2O43150 1006 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TTI1O43156 1089 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TACC1O75410 805 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 FBXO21O94952 628 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 HNRNPLP14866 589 aaKnown RBP eCLIP4.62□□□□□ -1.673e-6■■□□□ 11.8
HERC4-204ENST00000395198 ALOX15P16050 662 aaPredicted RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 GUCY1A2P33402 732 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 RDXP35241 583 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 IRS1P35568 1242 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 CDK17Q00537 523 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ATP2B2Q01814 1243 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 RUNX1T1Q06455 604 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 LLGL1Q15334 1064 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 PCNX4Q63HM2 1172 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ALG1LQ6GMV1 187 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 LBX2Q6XYB7 198 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 B4GALNT4Q76KP1 1039 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 RSPH3Q86UC2 560 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 KRT35Q92764 455 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 VPS39Q96JC1 886 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ACAP3Q96P50 834 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 CATSPER2Q96P56 530 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 ARHGAP39Q9C0H5 1083 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 TRIT1Q9H3H1 467 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 SPATS2LQ9NUQ6 558 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 TBC1D14Q9P2M4 693 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 PPRC1Q5VV67 1664 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 HNRNPCL2B2RXH8 293 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 HNRNPCL1O60812 293 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 APEHP13798 732 aaKnown RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 GDI1P31150 447 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 CYP4F8P98187 520 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 FOXK2Q01167 660 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 GALNT1Q10472 559 aaPredicted RBP4.62□□□□□ -1.67
HERC4-204ENST00000395198 GEN1Q17RS7 908 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 INAVAQ3KP66 663 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 FBXL19Q6PCT2 694 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 SLC22A9Q8IVM8 553 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 SYNPOQ8N3V7 929 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 LINS1Q8NG48 757 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 LILRB4Q8NHJ6 448 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 CDC26Q8NHZ8 85 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 PHOSPHO2Q8TCD6 241 aa4.62□□□□□ -1.67
HERC4-204ENST00000395198 HS6ST2Q96MM7 605 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms