RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 GRID2IPA4D2P6 1211 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 F8VZ95 297 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 H3BQF6 201 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 EXOC3O60645 756 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 FTCDO95954 541 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 FDX1P10109 184 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 MAPTP10636 758 aaKnown RBP15.21■□□□□ 0.03
SNCA-204ENST00000394989 NPEPPSP55786 919 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 ITIH3Q06033 890 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 GOLGA5Q8TBA6 731 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 C12orf42Q96LP6 360 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 PCIF1Q9H4Z3 704 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.03
SNCA-204ENST00000394989 DOCK5Q9H7D0 1870 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 N4BP1O75113 896 aaKnown RBP15.2■□□□□ 0.02
SNCA-204ENST00000394989 MYBL2P10244 700 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 ANO5Q75V66 913 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 HDXQ7Z353 690 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 LMO3Q8TAP4 145 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 HDAC7Q8WUI4 952 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 TMEM174Q8WUU8 243 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 MS4A14Q96JA4 679 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 PICK1Q9NRD5 415 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 PACSIN2Q9UNF0 486 aaPredicted RBP15.2■□□□□ 0.02
SNCA-204ENST00000394989 BTNL10A8MVZ5 291 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 WDR64B1ANS9 1081 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 DDX3XO00571 662 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNCA-204ENST00000394989 GFPT2O94808 682 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 DSG3P32926 999 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 PSMC5P62195 406 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 MEI1Q5TIA1 1274 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 ALKBH5Q6P6C2 394 aaKnown RBP15.2■□□□□ 0.02
SNCA-204ENST00000394989 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 NLGN2Q8NFZ4 835 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 KLRG1Q96E93 195 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 AS3MTQ9HBK9 375 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 LRRIQ3A6PVS8 624 aaPredicted RBP15.2■□□□□ 0.02
SNCA-204ENST00000394989 EVI5O60447 810 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 LRRN2O75325 713 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 NR3C2P08235 984 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 GTF2BQ00403 316 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 CASP8Q14790 479 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 PNMA2Q9UL42 364 aa15.2■□□□□ 0.02
SNCA-204ENST00000394989 JAK3P52333 1124 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
SNCA-204ENST00000394989 HIRAP54198 1017 aaPredicted RBP15.19■□□□□ 0.02
SNCA-204ENST00000394989 MYBPC2Q14324 1141 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 R3HDM1Q15032 1099 aaKnown RBP15.19■□□□□ 0.02
SNCA-204ENST00000394989 C1orf220Q5T0J3 134 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 C10orf76Q5T2E6 689 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 PHLDB3Q6NSJ2 640 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 HAUS6Q7Z4H7 955 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 GPATCH11Q8N954 259 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 INPP4AQ96PE3 977 aaPredicted RBP15.19■□□□□ 0.02
SNCA-204ENST00000394989 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 INTS2Q9H0H0 1204 aaKnown RBP15.19■□□□□ 0.02
SNCA-204ENST00000394989 TMEM206Q9H813 350 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 PDE11AQ9HCR9 933 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 DNAJC12Q9UKB3 198 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 LCTP09848 1927 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 SFNP31947 248 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 NCKAP1LP55160 1127 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 PEX3P56589 373 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 KRT76Q01546 638 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 DRAP1Q14919 205 aaPredicted RBP15.19■□□□□ 0.02
SNCA-204ENST00000394989 PLEKHO2Q8TD55 490 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 SYT11Q9BT88 431 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 LRRC1Q9BTT6 524 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 ST6GALNAC4Q9H4F1 302 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 RABEP2Q9H5N1 569 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 APEX2Q9UBZ4 518 aa15.19■□□□□ 0.02
SNCA-204ENST00000394989 RRP15Q9Y3B9 282 aaKnown RBP15.19■□□□□ 0.02
SNCA-204ENST00000394989 SLC16A4O15374 487 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 SOX5P35711 763 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
SNCA-204ENST00000394989 MYL7Q01449 175 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 ALCAMQ13740 583 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 APOBEC3FQ8IUX4 373 aaKnown RBP15.18■□□□□ 0.02
SNCA-204ENST00000394989 GSPT2Q8IYD1 628 aaKnown RBP15.18■□□□□ 0.02
SNCA-204ENST00000394989 SLC30A5Q8TAD4 765 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 LNX1Q8TBB1 728 aaPredicted RBP15.18■□□□□ 0.02
SNCA-204ENST00000394989 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 GOLPH3Q9H4A6 298 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 ZNF862O60290 1169 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 KCNA2P16389 499 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 CCND2P30279 289 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 STAT1P42224 750 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 OAZ1P54368 228 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 PPP3CAQ08209 521 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 XKR9Q5GH70 373 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 C12orf56Q8IXR9 622 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 MOV10L1Q9BXT6 1211 aaKnown RBP15.18■□□□□ 0.02
SNCA-204ENST00000394989 DMGDHQ9UI17 866 aaKnown RBP15.18■□□□□ 0.02
SNCA-204ENST00000394989 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 WDR90Q96KV7 1748 aa15.18■□□□□ 0.02
SNCA-204ENST00000394989 FERP16591 822 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms