RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 MINDY3Q9H8M7 445 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 RCOR1Q9UKL0 485 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 PCDHA7Q9UN72 937 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 LAMA2P24043 3122 aaKnown RBP22.1■■□□□ 1.13
SNCA-203ENST00000394986 A0A087X0B3 334 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.09■■□□□ 1.13
SNCA-203ENST00000394986 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.09■■□□□ 1.13
SNCA-203ENST00000394986 GPR182O15218 404 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 CUTAO60888 179 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 EFCAB14O75071 495 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 ME1P48163 572 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 FXR1P51114 621 aaKnown RBP eCLIP22.09■■□□□ 1.13
SNCA-203ENST00000394986 CDC42EP1Q00587 391 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 MCM6Q14566 821 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 MXD4Q14582 209 aaPredicted RBP22.09■■□□□ 1.13
SNCA-203ENST00000394986 SHC4Q6S5L8 630 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 SYT2Q8N9I0 419 aaPredicted RBP22.09■■□□□ 1.13
SNCA-203ENST00000394986 RAD54LQ92698 747 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 SLC9A7Q96T83 725 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 TSHZ2Q9NRE2 1034 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 ATP6V1DQ9Y5K8 247 aa22.09■■□□□ 1.13
SNCA-203ENST00000394986 NPHP3-ACAD11A0A0J9YXS1 232 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 ENPP3O14638 875 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 ASAP2O43150 1006 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 IBSPP21815 317 aaPredicted RBP22.08■■□□□ 1.13
SNCA-203ENST00000394986 TXLNAP40222 546 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 C1orf186Q6ZWK4 172 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 HERC6Q8IVU3 1022 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 LEO1Q8WVC0 666 aaPredicted RBP22.08■■□□□ 1.13
SNCA-203ENST00000394986 SPATA32Q96LK8 384 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 CCDC39Q9UFE4 941 aa22.08■■□□□ 1.13
SNCA-203ENST00000394986 HIP1RO75146 1068 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 AMHP03971 560 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 MYOGP15173 224 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 SMAD3P84022 425 aaKnown RBP22.07■■□□□ 1.12
SNCA-203ENST00000394986 CACNB1Q02641 598 aaPredicted RBP22.07■■□□□ 1.12
SNCA-203ENST00000394986 DAW1Q8N136 415 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 KCTD17Q8N5Z5 321 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 PDILTQ8N807 584 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 FTHL17Q9BXU8 183 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 PBX4Q9BYU1 374 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 GDPD2Q9HCC8 539 aa22.07■■□□□ 1.12
SNCA-203ENST00000394986 LRRIQ4A6NIV6 560 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 UPP2O95045 317 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 PHKA2P46019 1235 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 PTENP60484 403 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 TFDP1Q14186 410 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 NAALADL2Q58DX5 795 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 ARSHQ5FYA8 562 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 RRAGBQ5VZM2 374 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 PHOSPHO2Q8TCD6 241 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 LARP4BQ92615 738 aaKnown RBP22.06■■□□□ 1.12
SNCA-203ENST00000394986 ADAM2Q99965 735 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 TSPYL2Q9H2G4 693 aaPredicted RBP22.06■■□□□ 1.12
SNCA-203ENST00000394986 YBX2Q9Y2T7 364 aaKnown RBP22.06■■□□□ 1.12
SNCA-203ENST00000394986 RBM19Q9Y4C8 960 aaKnown RBP22.06■■□□□ 1.12
SNCA-203ENST00000394986 LOXHD1Q8IVV2 1947 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 DENND3A2RUS2 1198 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 SFPQP23246 707 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNCA-203ENST00000394986 MAPK7Q13164 816 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 DSC3Q14574 896 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 ODR4Q5SWX8 454 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 MICAL3Q7RTP6 2002 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 CATSPER4Q7RTX7 472 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 SRGAP1Q7Z6B7 1085 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 GPBP1Q86WP2 473 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 KIFC3Q9BVG8 833 aa22.06■■□□□ 1.12
SNCA-203ENST00000394986 INO80BQ9C086 356 aaPredicted RBP22.06■■□□□ 1.12
SNCA-203ENST00000394986 PTPRSQ13332 1948 aa22.05■■□□□ 1.12
SNCA-203ENST00000394986 GUCY2CP25092 1073 aa22.05■■□□□ 1.12
SNCA-203ENST00000394986 DNAJB2P25686 324 aa22.05■■□□□ 1.12
SNCA-203ENST00000394986 MBTD1Q05BQ5 628 aa22.05■■□□□ 1.12
SNCA-203ENST00000394986 TPRNQ4KMQ1 711 aa22.05■■□□□ 1.12
SNCA-203ENST00000394986 KIFAP3Q92845 792 aa22.05■■□□□ 1.12
SNCA-203ENST00000394986 SFI1A8K8P3 1242 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 INO80B-WBP1J3KQ70 363 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 GJB5O95377 273 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 STAT6P42226 847 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 CCDC73Q6ZRK6 1079 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 TOP1MTQ969P6 601 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 ZBED2Q9BTP6 218 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 NKX2-4Q9H2Z4 354 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 STK17AQ9UEE5 414 aa22.04■■□□□ 1.12
SNCA-203ENST00000394986 CIZ1Q9ULV3 898 aaPredicted RBP22.04■■□□□ 1.12
SNCA-203ENST00000394986 PIN4Q9Y237 131 aaKnown RBP22.04■■□□□ 1.12
SNCA-203ENST00000394986 ADGRA3Q8IWK6 1321 aa22.03■■□□□ 1.12
SNCA-203ENST00000394986 TLL1O43897 1013 aa22.03■■□□□ 1.12
SNCA-203ENST00000394986 POU5F1BQ06416 359 aa22.03■■□□□ 1.12
SNCA-203ENST00000394986 RESP18Q5W5W9 173 aa22.03■■□□□ 1.12
SNCA-203ENST00000394986 IFNLR1Q8IU57 520 aaPredicted RBP22.03■■□□□ 1.12
SNCA-203ENST00000394986 DRC1Q96MC2 740 aa22.03■■□□□ 1.12
SNCA-203ENST00000394986 REEP2Q9BRK0 252 aa22.03■■□□□ 1.12
SNCA-203ENST00000394986 RGS18Q9NS28 235 aa22.03■■□□□ 1.12
SNCA-203ENST00000394986 LCHNA4D1U4 455 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 ARHGEF15O94989 841 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 NAMPTP43490 491 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 PEX3P56589 373 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 CDCA2Q69YH5 1023 aaPredicted RBP22.02■■□□□ 1.12
SNCA-203ENST00000394986 TIFAQ96CG3 184 aa22.02■■□□□ 1.12
SNCA-203ENST00000394986 IFT74Q96LB3 600 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms