RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ACTR2P61160 394 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 BTNL9Q6UXG8 535 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 RHPN2Q8IUC4 686 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 TRIM59Q8IWR1 403 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 DHX37Q8IY37 1157 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 DNAJC7Q99615 494 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 STK24Q9Y6E0 443 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 EVI5O60447 810 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 COPB2P35606 906 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 FMO5P49326 533 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 KRT76Q01546 638 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 FSTL1Q12841 308 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 MIS18BP1Q6P0N0 1132 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 IMPG2Q9BZV3 1241 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
SMARCD1-202ENST00000394963 CBWD6Q4V339 395 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 CBWD3Q5JTY5 395 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 CBWD5Q5RIA9 395 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 RABGGTAQ92696 567 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 FAM49AQ9H0Q0 323 aaPredicted RBP17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 ZNF302Q9NR11 478 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 CYP26A1O43174 497 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 WHAMMP3Q1A5X7 153 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 C1orf186Q6ZWK4 172 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 RIT2Q99578 217 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 INTS2Q9H0H0 1204 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 DDX41Q9UJV9 622 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 PITPNM2Q9BZ72 1349 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 TLDC2A0PJX2 215 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 CCDC172P0C7W6 258 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 CNGA1P29973 690 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 ARHGAP25P42331 645 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 SLC5A5Q92911 643 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 PNKPQ96T60 521 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 TARS2Q9BW92 718 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 SYNCQ9H7C4 482 aa17.25■□□□□ 0.35
SMARCD1-202ENST00000394963 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 HIRAP54198 1017 aaPredicted RBP17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 CFAP221Q4G0U5 840 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 SIK3Q9Y2K2 1263 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 ZNF263O14978 683 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 TMOD1P28289 359 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 RIN2Q8WYP3 895 aaPredicted RBP17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 DHX38Q92620 1227 aaKnown RBP17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 COPS5Q92905 334 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 L2HGDHQ9H9P8 463 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 AKT3Q9Y243 479 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 CCNE2O96020 404 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 GJB1P08034 283 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 KLHDC7AQ5VTJ3 777 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 CCDC60Q8IWA6 550 aaPredicted RBP17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 ZBTB45Q96K62 511 aaPredicted RBP17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 MOV10L1Q9BXT6 1211 aaKnown RBP17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 JRKLQ9Y4A0 524 aa17.24■□□□□ 0.35
SMARCD1-202ENST00000394963 COL5A3P25940 1745 aaPredicted RBP17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 FOXN3O00409 490 aaPredicted RBP17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 CYP3A7P24462 503 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 BFSP1Q12934 665 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 MAP9Q49MG5 647 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 KCTD16Q68DU8 428 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 TMEM206Q9H813 350 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 CIITAP33076 1130 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 PIK3CAP42336 1068 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 NPTX2P47972 431 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 TRPC3Q13507 836 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 CLEC4DQ8WXI8 215 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 SLC35C1Q96A29 364 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 VTI1AQ96AJ9 217 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 SELENOOQ9BVL4 669 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 KCTD10Q9H3F6 313 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 EPB41L5Q9HCM4 733 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 PTPN22Q9Y2R2 807 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 KRIT1O00522 736 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 TGFB1I1O43294 461 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 PTGER2P43116 358 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 JAK3P52333 1124 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 SNRNP35Q16560 246 aaKnown RBP17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 ZNF571Q7Z3V5 609 aaPredicted RBP17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 FRMD5Q7Z6J6 570 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 USP37Q86T82 979 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 RNF149Q8NC42 400 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 ANKRD7Q92527 254 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 KLRG1Q96E93 195 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 TEPSINQ96N21 525 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 OSBPL9Q96SU4 736 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 MSTO1Q9BUK6 570 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
SMARCD1-202ENST00000394963 ASTN1O14525 1302 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 MOXD1Q6UVY6 613 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 TAX1BP1Q86VP1 789 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 SPATA33Q96N06 139 aa17.22■□□□□ 0.35
SMARCD1-202ENST00000394963 LRRC1Q9BTT6 524 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms