RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 ANKRD49Q8WVL7 239 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 CARMIL3Q8ND23 1372 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 HNRNPH2P55795 449 aaKnown RBP13.04□□□□□ -0.32
SIN3A-202ENST00000394947 PLIN5Q00G26 463 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 TGS1Q96RS0 853 aaKnown RBP13.04□□□□□ -0.32
SIN3A-202ENST00000394947 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 GRK2P25098 689 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 CIITAP33076 1130 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
SIN3A-202ENST00000394947 PI16Q6UXB8 463 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 WDR75Q8IWA0 830 aaKnown RBP13.04□□□□□ -0.32
SIN3A-202ENST00000394947 NDUFAF2Q8N183 169 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 THEM5Q8N1Q8 247 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 MAGEB10Q96LZ2 347 aaPredicted RBP13.04□□□□□ -0.32
SIN3A-202ENST00000394947 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
SIN3A-202ENST00000394947 NOP53Q9NZM5 478 aaKnown RBP13.04□□□□□ -0.32
SIN3A-202ENST00000394947 PNMA8BQ9ULN7 279 aaPredicted RBP13.04□□□□□ -0.32
SIN3A-202ENST00000394947 M0QYV0 167 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 TRIM37O94972 964 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 TJP3O95049 919 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 EPB42P16452 691 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 GPS1Q13098 491 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 MFSD4BQ5TF39 518 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 TMEM270Q6UE05 265 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 FAM213AQ9BRX8 229 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 DMAP1Q9NPF5 467 aaPredicted RBP13.03□□□□□ -0.32
SIN3A-202ENST00000394947 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 CCDC15Q0P6D6 951 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 CEP55Q53EZ4 464 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 CYFIP1Q7L576 1253 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 PLD3Q8IV08 490 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ABCB11O95342 1321 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ARHGAP10A1A4S6 786 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 GUCA1CO95843 209 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 TSC22D1Q15714 1073 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 HEATR4Q86WZ0 1026 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 VPS39Q96JC1 886 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 PBKQ96KB5 322 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 AP2B1P63010 937 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 PDXDC1Q6P996 788 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ZNF589Q86UQ0 364 aaPredicted RBP13.03□□□□□ -0.32
SIN3A-202ENST00000394947 RHPN2Q8IUC4 686 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 MIER2Q8N344 545 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 PPP1R14AQ96A00 147 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ATP5JP18859 108 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 FGFR4P22455 802 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 ZNF804BA4D1E1 1349 aa13.03□□□□□ -0.32
SIN3A-202ENST00000394947 HMGB1P1B2RPK0 211 aaPredicted RBP13.02□□□□□ -0.32
SIN3A-202ENST00000394947 K7ERI5 159 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 SOAT1P35610 550 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 GCLMP48507 274 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 RBM6P78332 1123 aaKnown RBP13.02□□□□□ -0.32
SIN3A-202ENST00000394947 SLFNL1Q499Z3 407 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 EXOC8Q8IYI6 725 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 KRT87PA6NCN2 255 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 PRR23AA6NEV1 266 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 CYTH3O43739 400 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 LZTS3O60299 673 aaPredicted RBP13.02□□□□□ -0.32
SIN3A-202ENST00000394947 KRT8P05787 483 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 PSAPP07602 524 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 ALS2CLQ60I27 953 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 CCDC81Q6ZN84 652 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 GAS2L3Q86XJ1 694 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 ZNF341Q9BYN7 854 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 SELENONQ9NZV5 590 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 APBA1Q02410 837 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 IYDQ6PHW0 289 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 C1orf54Q8WWF1 131 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 TMEM60Q9H2L4 133 aa13.02□□□□□ -0.32
SIN3A-202ENST00000394947 MARCOQ9UEW3 520 aaPredicted RBP13.02□□□□□ -0.32
SIN3A-202ENST00000394947 RWDD2BP57060 319 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 PPP2R5BQ15173 497 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 IFNEQ86WN2 208 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 TUBB6Q9BUF5 446 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 CNOT10Q9H9A5 744 aaKnown RBP13.02□□□□□ -0.33
SIN3A-202ENST00000394947 MAP10Q9P2G4 905 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 CTIFO43310 598 aaKnown RBP13.02□□□□□ -0.33
SIN3A-202ENST00000394947 PDIA2Q13087 525 aaKnown RBP13.02□□□□□ -0.33
SIN3A-202ENST00000394947 SH3BP5LQ7L8J4 393 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 EAF2Q96CJ1 260 aaPredicted RBP13.02□□□□□ -0.33
SIN3A-202ENST00000394947 ERLEC1Q96DZ1 483 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 NDUFA10O95299 355 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 CHRNA3P32297 505 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 DEUP1Q05D60 604 aa13.02□□□□□ -0.33
SIN3A-202ENST00000394947 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.33
SIN3A-202ENST00000394947 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms