RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 DENND3A2RUS2 1198 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 B4GALT3O60512 393 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 TBX10O75333 385 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 CD2BP2O95400 341 aaKnown RBP9.93□□□□□ -0.82
ATG4A-205ENST00000394892 HOXA11P31270 313 aaPredicted RBP9.93□□□□□ -0.82
ATG4A-205ENST00000394892 PBX3P40426 434 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 ERVFC1P60507 584 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 CYP4A11Q02928 519 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 NCAPH2Q6IBW4 605 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 POTEHQ6S545 545 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 C4orf19Q8IY42 314 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 VN1R2Q8NFZ6 395 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 POF1BQ8WVV4 589 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 WASF1Q92558 559 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 P2RX5Q93086 422 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 TMEM143Q96AN5 459 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 MFSD14AQ96MC6 490 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 LMAN2LQ9H0V9 348 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 ELAC1Q9H777 363 aaKnown RBP9.93□□□□□ -0.82
ATG4A-205ENST00000394892 C1orf112Q9NSG2 853 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 BMP2KQ9NSY1 1161 aaPredicted RBP9.93□□□□□ -0.82
ATG4A-205ENST00000394892 CLDND1Q9NY35 253 aa9.93□□□□□ -0.82
ATG4A-205ENST00000394892 A0A0U1RQF3 1178 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 LYPLA2O95372 231 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 GLP2RO95838 553 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 CENPBP07199 599 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-205ENST00000394892 SPATA31C1P0DKV0 1188 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 XBP1P17861 261 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 TMOD1P28289 359 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 RBM25P49756 843 aaKnown RBP9.92□□□□□ -0.82
ATG4A-205ENST00000394892 MRE11P49959 708 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 AFF1P51825 1210 aaKnown RBP9.92□□□□□ -0.82
ATG4A-205ENST00000394892 ADAM15Q13444 863 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 UBXN11Q5T124 520 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 RHPN2Q8IUC4 686 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 ADHFE1Q8IWW8 467 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 C4orf32Q8N8J7 132 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 COLGALT1Q8NBJ5 622 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 PRPF31Q8WWY3 499 aaKnown RBP9.92□□□□□ -0.82
ATG4A-205ENST00000394892 NLRP7Q8WX94 980 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 LPPQ93052 612 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 PPP2R3CQ969Q6 453 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 CEP170P1Q96L14 293 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 EIF2AK1Q9BQI3 630 aaKnown RBP9.92□□□□□ -0.82
ATG4A-205ENST00000394892 TMEM117Q9H0C3 514 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 ATP6V0A4Q9HBG4 840 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 CLEC1BQ9P126 229 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 LRFN2Q9ULH4 789 aa9.92□□□□□ -0.82
ATG4A-205ENST00000394892 POTEMA6NI47 508 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 FSCN2O14926 492 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 FGF18O76093 207 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 YWHABP31946 246 aaKnown RBP9.91□□□□□ -0.82
ATG4A-205ENST00000394892 TXKP42681 527 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 TOB1P50616 345 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-205ENST00000394892 LAMTOR4Q0VGL1 99 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 NBR1Q14596 966 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 CALCRLQ16602 461 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 LONRF3Q496Y0 759 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 NAALADL2Q58DX5 795 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 ZNF410Q86VK4 478 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 TMEM173Q86WV6 379 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-205ENST00000394892 TPH2Q8IWU9 490 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 FBXO18Q8NFZ0 1043 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 HELQQ8TDG4 1101 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 ASAP3Q8TDY4 903 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 BCL7CQ8WUZ0 217 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-205ENST00000394892 MSLNLQ96KJ4 702 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 NLRP4Q96MN2 994 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 TRAIPQ9BWF2 469 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 GCOM2Q9BZD3 368 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-205ENST00000394892 IGFLR1Q9H665 355 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
ATG4A-205ENST00000394892 PER2O15055 1255 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 MED24O75448 989 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 ATP2B1P20020 1258 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 MCM7P33993 719 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 PHKA2P46019 1235 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 NHLH1Q02575 133 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 ZP2Q05996 745 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 KCNC3Q14003 757 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 EMC2Q15006 297 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 ZNF174Q15697 407 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 CLUL1Q15846 466 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 ECM1Q16610 540 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 AMHR2Q16671 573 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 XKR9Q5GH70 373 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 ODR4Q5SWX8 454 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 AGMOQ6ZNB7 445 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 FAM43BQ6ZT52 329 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-205ENST00000394892 FERMT3Q86UX7 667 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 SLFN12Q8IYM2 578 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 RNF169Q8NCN4 708 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 FEZF2Q8TBJ5 459 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 PIGOQ8TEQ8 1089 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 LLPHQ9BRT6 129 aaKnown RBP9.9□□□□□ -0.82
ATG4A-205ENST00000394892 ZSWIM4Q9H7M6 989 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 TTC12Q9H892 705 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-205ENST00000394892 PCDHA12Q9UN75 941 aa9.9□□□□□ -0.82
ATG4A-205ENST00000394892 KAT6AQ92794 2004 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms