RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 RHBDL3P58872 404 aa17.39■□□□□ 0.37
PCDH1-203ENST00000394536 RHOT2Q8IXI1 618 aa17.39■□□□□ 0.37
PCDH1-203ENST00000394536 SAAL1Q96ER3 474 aa17.39■□□□□ 0.37
PCDH1-203ENST00000394536 INPP4AQ96PE3 977 aaPredicted RBP17.39■□□□□ 0.37
PCDH1-203ENST00000394536 FAM118BQ9BPY3 351 aa17.39■□□□□ 0.37
PCDH1-203ENST00000394536 STK33Q9BYT3 514 aa17.39■□□□□ 0.37
PCDH1-203ENST00000394536 MSH4O15457 936 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 CYP26A1O43174 497 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 ATP5DP30049 168 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 ZNF844Q08AG5 666 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 C6orf118Q5T5N4 469 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 JAMLQ86YT9 394 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 BTBD6Q96KE9 485 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 IFT74Q96LB3 600 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 ERP44Q9BS26 406 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 KLHL14Q9P2G3 628 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 CCPG1Q9ULG6 757 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 MRPL11Q9Y3B7 192 aaKnown RBP17.38■□□□□ 0.37
PCDH1-203ENST00000394536 M0R2N6 131 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 PADI6Q6TGC4 694 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 TMEM179Q6ZVK1 233 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 C18orf8Q96DM3 657 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 COL1A1P02452 1464 aaPredicted RBP17.38■□□□□ 0.37
PCDH1-203ENST00000394536 SLC16A4O15374 487 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 ATF2P15336 505 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 FLT3P36888 993 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 CCDC6Q16204 474 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 SHROOM1Q2M3G4 852 aaPredicted RBP17.38■□□□□ 0.37
PCDH1-203ENST00000394536 RINT1Q6NUQ1 792 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 AADACL2Q6P093 401 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 CROCCP2Q86T23 111 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 ZFPM1Q8IX07 1006 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 FBF1Q8TES7 1133 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 LXNQ9BS40 222 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 SLC40A1Q9NP59 571 aa17.38■□□□□ 0.37
PCDH1-203ENST00000394536 EIF4E1BA6NMX2 242 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 SUN1O94901 812 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 NBPF9Q3BBW0 867 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 EPC2Q52LR7 807 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 MICAL1Q8TDZ2 1067 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 CALR3Q96L12 384 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 XPO6Q96QU8 1125 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 AGPAT1Q99943 283 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 SYNCQ9H7C4 482 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 APEX2Q9UBZ4 518 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 PITPNM2Q9BZ72 1349 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 BAZ2AQ9UIF9 1905 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 TRIM37O94972 964 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 NEDD9Q14511 834 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 LONRF1Q17RB8 773 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 DCAF4Q8WV16 495 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 NT5C1BQ96P26 610 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 SUCLA2Q9P2R7 463 aaPredicted RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 ANAPC7Q9UJX3 599 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 ZNF148Q9UQR1 794 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 IKBKGQ9Y6K9 419 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 HNRNPDLO14979 420 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 HOXA7P31268 230 aaPredicted RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 HSPA9P38646 679 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 SKOR1P84550 965 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 PARP9Q8IXQ6 854 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 SRRM1Q8IYB3 904 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 ARHGEF2Q92974 986 aaKnown RBP17.37■□□□□ 0.37
PCDH1-203ENST00000394536 SLC35C1Q96A29 364 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 RUNDC3BQ96NL0 473 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 NUP85Q9BW27 656 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 WDR11Q9BZH6 1224 aa17.37■□□□□ 0.37
PCDH1-203ENST00000394536 FAM86B1E9PN63 330 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 ATP2A1O14983 1001 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 HIP1RO75146 1068 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 FAM86B2P0C5J1 330 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 EIF2AK2P19525 551 aaKnown RBP17.36■□□□□ 0.37
PCDH1-203ENST00000394536 ATP11AP98196 1134 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 LRIG3Q6UXM1 1119 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 CNOT8Q9UFF9 292 aaKnown RBP17.36■□□□□ 0.37
PCDH1-203ENST00000394536 ANAPC5Q9UJX4 755 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 CEP83Q9Y592 693 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 IPO5O00410 1097 aaKnown RBP17.36■□□□□ 0.37
PCDH1-203ENST00000394536 VAMP7P51809 220 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 MFAP3P55082 362 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 RWDD2BP57060 319 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 CLUL1Q15846 466 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 DCUN1D2Q6PH85 259 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 ARMC9Q7Z3E5 817 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 SH3GL2Q99962 352 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 TRIM7Q9C029 511 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
PCDH1-203ENST00000394536 COMTP21964 271 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 BYSLQ13895 437 aaKnown RBP17.36■□□□□ 0.37
PCDH1-203ENST00000394536 SLMAPQ14BN4 828 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 TRIM68Q6AZZ1 485 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 ACTRT1Q8TDG2 376 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 ACCSQ96QU6 501 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 IMPG2Q9BZV3 1241 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
PCDH1-203ENST00000394536 SYNGAP1Q96PV0 1343 aa17.36■□□□□ 0.37
PCDH1-203ENST00000394536 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms