RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 SYT11Q9BT88 431 aa18.1■□□□□ 0.49
PRDM5-202ENST00000394435 RRP15Q9Y3B9 282 aaKnown RBP18.1■□□□□ 0.49
PRDM5-202ENST00000394435 COL4A5P29400 1685 aa18.1■□□□□ 0.49
PRDM5-202ENST00000394435 ICAM1P05362 532 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 IRAK1P51617 712 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 NPEPPSP55786 919 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 DLG4P78352 724 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 PHLDB3Q6NSJ2 640 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 MREGQ8N565 214 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 SH2D3CQ8N5H7 860 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 CAPS2Q9BXY5 557 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 DDX47Q9H0S4 455 aaKnown RBP18.09■□□□□ 0.49
PRDM5-202ENST00000394435 TAF1DQ9H5J8 278 aaPredicted RBP18.09■□□□□ 0.49
PRDM5-202ENST00000394435 SEPT11Q9NVA2 429 aaKnown RBP18.09■□□□□ 0.49
PRDM5-202ENST00000394435 ZNF233A6NK53 670 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 KRIT1O00522 736 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 PPFIA4O75335 1185 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 ITGA4P13612 1032 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 HLTFQ14527 1009 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRDM5-202ENST00000394435 KCTD16Q68DU8 428 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 TTC19Q6DKK2 380 aaPredicted RBP18.09■□□□□ 0.49
PRDM5-202ENST00000394435 DDX42Q86XP3 938 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRDM5-202ENST00000394435 SLC9A9Q8IVB4 645 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 WHAMMQ8TF30 809 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 SH2D3AQ9BRG2 576 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 TAS2R14Q9NYV8 317 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 AMFRQ9UKV5 643 aa18.09■□□□□ 0.49
PRDM5-202ENST00000394435 NCANO14594 1321 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 SART1O43290 800 aaKnown RBP18.08■□□□□ 0.49
PRDM5-202ENST00000394435 BUB1BO60566 1050 aaPredicted RBP18.08■□□□□ 0.49
PRDM5-202ENST00000394435 LRRN2O75325 713 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 TMEM253P0C7T8 217 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 TNFAIP3P21580 790 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 NEK9Q8TD19 979 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 HES6Q96HZ4 224 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 ZNF341Q9BYN7 854 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 ISCUQ9H1K1 167 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 SAMM50Q9Y512 469 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 ZHX2Q9Y6X8 837 aa18.08■□□□□ 0.49
PRDM5-202ENST00000394435 RPTORQ8N122 1335 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 FOXN3O00409 490 aaPredicted RBP18.08■□□□□ 0.48
PRDM5-202ENST00000394435 DHX15O43143 795 aaKnown RBP18.08■□□□□ 0.48
PRDM5-202ENST00000394435 P4HBP07237 508 aaKnown RBP18.08■□□□□ 0.48
PRDM5-202ENST00000394435 KRT13P13646 458 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 GNGT1P63211 74 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 ITGB3BPQ13352 177 aaPredicted RBP18.08■□□□□ 0.48
PRDM5-202ENST00000394435 PALB2Q86YC2 1186 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 CPXCR1Q8N123 301 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 RASGEF1CQ8N431 466 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 LMO3Q8TAP4 145 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 CLEC4DQ8WXI8 215 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 ARHGEF26Q96DR7 871 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 CALR3Q96L12 384 aaKnown RBP18.08■□□□□ 0.48
PRDM5-202ENST00000394435 DEFB129Q9H1M3 183 aa18.08■□□□□ 0.48
PRDM5-202ENST00000394435 EMSYQ7Z589 1322 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 ECHS1P30084 290 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 TRMT1LQ7Z2T5 733 aaKnown RBP18.07■□□□□ 0.48
PRDM5-202ENST00000394435 TTLL6Q8N841 843 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 CTNNBL1Q8WYA6 563 aaPredicted RBP18.07■□□□□ 0.48
PRDM5-202ENST00000394435 RFFLQ8WZ73 363 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 PPP1R9AQ9ULJ8 1098 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 LOXHD1Q8IVV2 1947 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 MYO1CO00159 1063 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 BCRP11274 1271 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 DGKZQ13574 1117 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 TNIP1Q15025 636 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 TKFCQ3LXA3 575 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 RTKN2Q8IZC4 609 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 ZSWIM2Q8NEG5 633 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 CBWD1Q9BRT8 395 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 RABEP2Q9H5N1 569 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 AGO4Q9HCK5 861 aaKnown RBP18.07■□□□□ 0.48
PRDM5-202ENST00000394435 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
PRDM5-202ENST00000394435 LARSQ9P2J5 1176 aaKnown RBP18.07■□□□□ 0.48
PRDM5-202ENST00000394435 TMEM150BA6NC51 233 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 TRIM66O15016 1216 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 ASNSP08243 561 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 CCDC172P0C7W6 258 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 ALAS1P13196 640 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 PPATQ06203 517 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 FKBP1CQ5VVH2 108 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 ARHGEF19Q8IW93 802 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 THAP2Q9H0W7 228 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 RAVER2Q9HCJ3 691 aaKnown RBP18.06■□□□□ 0.48
PRDM5-202ENST00000394435 UBE2TQ9NPD8 197 aaPredicted RBP18.06■□□□□ 0.48
PRDM5-202ENST00000394435 PGAP2Q9UHJ9 254 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 AMACRQ9UHK6 382 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 CCDC188H7C350 402 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
PRDM5-202ENST00000394435 RARRES1P49788 294 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 MRPS9P82933 396 aaKnown RBP18.06■□□□□ 0.48
PRDM5-202ENST00000394435 PPP3CAQ08209 521 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 KIF22Q14807 665 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 NBPF9Q3BBW0 867 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 TBC1D10BQ4KMP7 808 aaPredicted RBP18.06■□□□□ 0.48
PRDM5-202ENST00000394435 FAM83AQ86UY5 434 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 SLC20A1Q8WUM9 679 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 ACCSQ96QU6 501 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 NEUROG2Q9H2A3 272 aa18.06■□□□□ 0.48
PRDM5-202ENST00000394435 GRIN2DO15399 1336 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms