RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 UPP2O95045 317 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 BMP15O95972 392 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 DARSP14868 501 aaKnown RBP9.53□□□□□ -0.88
APLF-202ENST00000394342 SYT1P21579 422 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 SARSP49591 514 aaKnown RBP9.53□□□□□ -0.88
APLF-202ENST00000394342 RARRES1P49788 294 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 ARL6IP4Q66PJ3 421 aaKnown RBP9.53□□□□□ -0.88
APLF-202ENST00000394342 FAM117BQ6P1L5 589 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 RTN4RL1Q86UN2 441 aaPredicted RBP9.53□□□□□ -0.88
APLF-202ENST00000394342 RHPN2Q8IUC4 686 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 NPAS4Q8IUM7 802 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 PSPC1Q8WXF1 523 aaKnown RBP9.53□□□□□ -0.88
APLF-202ENST00000394342 MYLIPQ8WY64 445 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 YME1L1Q96TA2 773 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 INO80BQ9C086 356 aaPredicted RBP9.53□□□□□ -0.88
APLF-202ENST00000394342 ATP6V0A4Q9HBG4 840 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 RGS18Q9NS28 235 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 C1orf112Q9NSG2 853 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 COL4A3BPQ9Y5P4 624 aa9.53□□□□□ -0.88
APLF-202ENST00000394342 MTCL1Q9Y4B5 1905 aaKnown RBP9.52□□□□□ -0.88
APLF-202ENST00000394342 A0A087WZ62 844 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 DENND3A2RUS2 1198 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 LINC01553A4QN01 128 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 RBAK-RBAKDNI3L0D1 243 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 MGEA5O60502 916 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 ARHGEF15O94989 841 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 STAG3L1P0CL83 205 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 PDIA4P13667 645 aaKnown RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 FOSL2P15408 326 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 ANK1P16157 1881 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 SFPQP23246 707 aaKnown RBP eCLIP9.52□□□□□ -0.89
APLF-202ENST00000394342 CCT6AP40227 531 aaKnown RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 ERVK-21P61565 698 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 LAMTOR4Q0VGL1 99 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 DSC3Q14574 896 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 MXD4Q14582 209 aaPredicted RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 IL17AQ16552 155 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 KRT79Q5XKE5 535 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 FERMT3Q86UX7 667 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 CRIPAKQ8N1N5 446 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 PIGOQ8TEQ8 1089 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 PRPF31Q8WWY3 499 aaKnown RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 TMEM143Q96AN5 459 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 SAMD11Q96NU1 681 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 TGS1Q96RS0 853 aaKnown RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 GAS2L1Q99501 681 aaPredicted RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 ADAM2Q99965 735 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 FDXACB1Q9BRP7 624 aaPredicted RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 PRDM12Q9H4Q4 367 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 RC3H2Q9HBD1 1191 aaKnown RBP9.52□□□□□ -0.89
APLF-202ENST00000394342 XPNPEP1Q9NQW7 623 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 MTMR6Q9Y217 621 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 C5orf42Q9H799 3197 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 VCANP13611 3396 aa9.52□□□□□ -0.89
APLF-202ENST00000394342 CUL9Q8IWT3 2517 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 C9IYK1 514 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 SLC26A4O43511 780 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 STX6O43752 255 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 ZSCAN20P17040 1043 aaPredicted RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 FAM189BP81408 668 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 POU5F1BQ06416 359 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 RESTQ13127 1097 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 TFDP1Q14186 410 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 SLC24A5Q71RS6 500 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 SRGAP1Q7Z6B7 1085 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 KSR1Q8IVT5 923 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 CMTR2Q8IYT2 770 aaKnown RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 KCTD17Q8N5Z5 321 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 MCPH1Q8NEM0 835 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 SNX29Q8TEQ0 813 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 ZNF689Q96CS4 500 aaPredicted RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 ZNF668Q96K58 619 aaPredicted RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 AK8Q96MA6 479 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 NLRP4Q96MN2 994 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 ELAC1Q9H777 363 aaKnown RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 IFT122Q9HBG6 1241 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 CHST12Q9NRB3 414 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
APLF-202ENST00000394342 DACT1Q9NYF0 836 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 LRFN2Q9ULH4 789 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 KIAA1024Q9UPX6 916 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 PCDHB7Q9Y5E2 793 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 ADGRA3Q8IWK6 1321 aa9.51□□□□□ -0.89
APLF-202ENST00000394342 ARHGEF35A5YM69 484 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 VWA3AA6NCI4 1184 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 USO1O60763 962 aaKnown RBP9.5□□□□□ -0.89
APLF-202ENST00000394342 DGKIO75912 1065 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 SRGAP2CP0DJJ0 459 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 POU3F3P20264 500 aaPredicted RBP9.5□□□□□ -0.89
APLF-202ENST00000394342 ARL2P36404 184 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 PHKA2P46019 1235 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
APLF-202ENST00000394342 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
APLF-202ENST00000394342 ECM1Q16610 540 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 HYIQ5T013 277 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 CATSPER4Q7RTX7 472 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms