RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 AK8Q96MA6 479 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 ERP44Q9BS26 406 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 GANQ9H2C0 597 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 KDM4CQ9H3R0 1056 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 ASIC3Q9UHC3 531 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 TMEM59LQ9UK28 342 aa15.7■□□□□ 0.1
SFXN3-202ENST00000393459 POLD1P28340 1107 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 RAD23BP54727 409 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 DRP2Q13474 957 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 CTTNQ14247 550 aaKnown RBP15.69■□□□□ 0.1
SFXN3-202ENST00000393459 USH1GQ495M9 461 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
SFXN3-202ENST00000393459 DTX3LQ8TDB6 740 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 PBKQ96KB5 322 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 C9orf72Q96LT7 481 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 EPB41L4BQ9H329 900 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 PKD2L1Q9P0L9 805 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 ARAP2Q8WZ64 1704 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 STX2P32856 288 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 MSH2P43246 934 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 IKQ13123 557 aaPredicted RBP15.69■□□□□ 0.1
SFXN3-202ENST00000393459 PRR16Q569H4 304 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 KIAA1755Q5JYT7 1200 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 CLEC4GQ6UXB4 293 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 LNX1Q8TBB1 728 aaPredicted RBP15.69■□□□□ 0.1
SFXN3-202ENST00000393459 CRAMP1Q96RY5 1269 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 PCIF1Q9H4Z3 704 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 SLCO1B3Q9NPD5 702 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 A0A1B0GVG6 124 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 ENTPD5O75356 428 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 MYL1P05976 194 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 SSR1P43307 286 aaKnown RBP15.69■□□□□ 0.1
SFXN3-202ENST00000393459 AP1ARQ63HQ0 302 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 MIGA2Q7L4E1 593 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 EXOC3L1Q86VI1 746 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 VPS36Q86VN1 386 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 CCDC65Q8IXS2 484 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 HEMGNQ9BXL5 484 aa15.69■□□□□ 0.1
SFXN3-202ENST00000393459 ZNF831Q5JPB2 1677 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 CCDC169A6NNP5 214 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 DNAJC8O75937 253 aaPredicted RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 CBX6O95503 412 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 AFPP02771 609 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 ATP2A2P16615 1042 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 ADCY7P51828 1080 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 DNAJC3Q13217 504 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 SHROOM1Q2M3G4 852 aaPredicted RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 AGBL2Q5U5Z8 902 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 C12orf60Q5U649 245 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 TTC27Q6P3X3 843 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 CCDC137Q6PK04 289 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 TTC8Q8TAM2 541 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 ACTRT1Q8TDG2 376 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 PABPC3Q9H361 631 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 C12orf65Q9H3J6 166 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 RGL1Q9NZL6 768 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 CPSF2Q9P2I0 782 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 USP21Q9UK80 565 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 NMT1P30419 496 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 LACTBP83111 547 aaPredicted RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 MXRA7P84157 204 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 ATP11AP98196 1134 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 MPP2Q14168 576 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 DRAP1Q14919 205 aaPredicted RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 EPC2Q52LR7 807 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 ZDHHC14Q8IZN3 488 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 ERP27Q96DN0 273 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 TGS1Q96RS0 853 aaKnown RBP15.68■□□□□ 0.1
SFXN3-202ENST00000393459 RAB34Q9BZG1 259 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 CUEDC2Q9H467 287 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 ADAM22Q9P0K1 906 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 COG5Q9UP83 839 aa15.68■□□□□ 0.1
SFXN3-202ENST00000393459 DPPA5A6NC42 116 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 SNX3O60493 162 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 MED24O75448 989 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 RASA1P20936 1047 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 STAT1P42224 750 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 FAM114A2Q9NRY5 505 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 TISP43B9A030 160 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 LDHBP07195 334 aaKnown RBP15.67■□□□□ 0.1
SFXN3-202ENST00000393459 BRAFP15056 766 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 TNFAIP3P21580 790 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 DDX50Q9BQ39 737 aaKnown RBP15.67■□□□□ 0.1
SFXN3-202ENST00000393459 PAGR1Q9BTK6 254 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 RAB17Q9H0T7 212 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 USP15Q9Y4E8 981 aaPredicted RBP15.67■□□□□ 0.1
SFXN3-202ENST00000393459 ATXN2Q99700 1313 aaKnown RBP15.67■□□□□ 0.1
SFXN3-202ENST00000393459 LRP5O75197 1615 aa15.67■□□□□ 0.1
SFXN3-202ENST00000393459 RGL2O15211 777 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 SPOPO43791 374 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 CHKAP35790 457 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 GNAQP50148 359 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 LLGL2Q6P1M3 1020 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 CYP4X1Q8N118 509 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 HAS1Q92839 578 aa15.66■□□□□ 0.1
SFXN3-202ENST00000393459 IRAK4Q9NWZ3 460 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms