RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 FNTAP49354 379 aa20.44■□□□□ 0.86
CBX1-202ENST00000393408 CYP2J2P51589 502 aa20.44■□□□□ 0.86
CBX1-202ENST00000393408 DHX9Q08211 1270 aaKnown RBP20.44■□□□□ 0.86
CBX1-202ENST00000393408 FMNL3Q8IVF7 1028 aa20.44■□□□□ 0.86
CBX1-202ENST00000393408 FAM178BQ8IXR5 827 aa20.44■□□□□ 0.86
CBX1-202ENST00000393408 CARD9Q9H257 536 aa20.44■□□□□ 0.86
CBX1-202ENST00000393408 FRMD4BQ9Y2L6 1034 aa20.44■□□□□ 0.86
CBX1-202ENST00000393408 CCDC172P0C7W6 258 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 PRELPP51888 382 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 FKBP1AP62942 108 aaKnown RBP20.43■□□□□ 0.86
CBX1-202ENST00000393408 DACT2Q5SW24 774 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 FBXW10Q5XX13 1052 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 STXBP4Q6ZWJ1 553 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 CNPY4Q8N129 248 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 TXLNGYQ9BZA5 131 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 PPANQ9NQ55 473 aaKnown RBP20.43■□□□□ 0.86
CBX1-202ENST00000393408 PPP2R2AP63151 447 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 MYL7Q01449 175 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 RRP1BQ14684 758 aaKnown RBP20.43■□□□□ 0.86
CBX1-202ENST00000393408 STRIP1Q5VSL9 837 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 TAS2R14Q9NYV8 317 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 BCCIPQ9P287 314 aaKnown RBP eCLIP20.43■□□□□ 0.86
CBX1-202ENST00000393408 DAAM1Q9Y4D1 1078 aa20.43■□□□□ 0.86
CBX1-202ENST00000393408 ONECUT3O60422 494 aaPredicted RBP20.42■□□□□ 0.86
CBX1-202ENST00000393408 PPFIA2O75334 1257 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 TNFAIP3P21580 790 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 KIF22Q14807 665 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 RBM26Q5T8P6 1007 aaKnown RBP20.42■□□□□ 0.86
CBX1-202ENST00000393408 PALB2Q86YC2 1186 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 SPICE1Q8N0Z3 855 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 RAB17Q9H0T7 212 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 THAP2Q9H0W7 228 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 WRAP73Q9P2S5 460 aaPredicted RBP20.42■□□□□ 0.86
CBX1-202ENST00000393408 ODF2LQ9ULJ1 636 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 CAPN7Q9Y6W3 813 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 GMNCA6NCL1 334 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 MUTP22033 750 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 PPP2R5EQ16537 467 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 TEX2Q8IWB9 1127 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 SEPT12Q8IYM1 358 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 PRPF38AQ8NAV1 312 aaKnown RBP20.42■□□□□ 0.86
CBX1-202ENST00000393408 C3orf20Q8ND61 904 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 CYFIP2Q96F07 1278 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 NACC1Q96RE7 527 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 CNOT8Q9UFF9 292 aaKnown RBP20.42■□□□□ 0.86
CBX1-202ENST00000393408 NOVA2Q9UNW9 492 aaKnown RBP20.42■□□□□ 0.86
CBX1-202ENST00000393408 COG5Q9UP83 839 aa20.42■□□□□ 0.86
CBX1-202ENST00000393408 ATRNL1Q5VV63 1379 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 ANKRD62A6NC57 917 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 TRAPPC3O43617 180 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 CFBP00751 764 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 PRPF4BQ13523 1007 aaKnown RBP20.41■□□□□ 0.86
CBX1-202ENST00000393408 SPDYCQ5MJ68 293 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 ODR4Q5SWX8 454 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 PHLDB3Q6NSJ2 640 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 C6orf89Q6UWU4 347 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 LMO3Q8TAP4 145 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 NAP1L3Q99457 506 aaPredicted RBP20.41■□□□□ 0.86
CBX1-202ENST00000393408 FMO2Q99518 471 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 TMX4Q9H1E5 349 aaPredicted RBP20.41■□□□□ 0.86
CBX1-202ENST00000393408 ERVK-5Q9HDB9 667 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 KCND2Q9NZV8 630 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 GAS7O60861 476 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 PAEPP09466 180 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 TMOD1P28289 359 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 HNRNPH1P31943 449 aaKnown RBP20.41■□□□□ 0.86
CBX1-202ENST00000393408 DR1Q01658 176 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 BFSP1Q12934 665 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 ARHGAP44Q17R89 818 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 DUPD1Q68J44 220 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 KCNV1Q6PIU1 500 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 SLC9A9Q8IVB4 645 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 STRA6Q9BX79 667 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 TRIM31Q9BZY9 425 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 LRRC4CQ9HCJ2 640 aa20.41■□□□□ 0.86
CBX1-202ENST00000393408 STAT2P52630 851 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 KRT71Q3SY84 523 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 ODF2Q5BJF6 829 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 ALG3Q92685 438 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 ERP44Q9BS26 406 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 ZDHHC18Q9NUE0 388 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 SERPINA10Q9UK55 444 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 LOXHD1Q8IVV2 1947 aa20.4■□□□□ 0.86
CBX1-202ENST00000393408 GOLGA6L10A0A0M3HER8 536 aa20.39■□□□□ 0.86
CBX1-202ENST00000393408 DCDC2CA8MYV0 355 aa20.39■□□□□ 0.86
CBX1-202ENST00000393408 FOXN3O00409 490 aaPredicted RBP20.39■□□□□ 0.86
CBX1-202ENST00000393408 RFX1P22670 979 aa20.39■□□□□ 0.86
CBX1-202ENST00000393408 HADHBP55084 474 aaKnown RBP20.39■□□□□ 0.86
CBX1-202ENST00000393408 MAGOHP61326 146 aaKnown RBP20.39■□□□□ 0.86
CBX1-202ENST00000393408 TRAF1Q13077 416 aa20.39■□□□□ 0.86
CBX1-202ENST00000393408 ZNF211Q13398 564 aaPredicted RBP20.39■□□□□ 0.86
CBX1-202ENST00000393408 BANK1Q8NDB2 785 aa20.39■□□□□ 0.86
CBX1-202ENST00000393408 MAGOHBQ96A72 148 aaKnown RBP20.39■□□□□ 0.86
CBX1-202ENST00000393408 AGPAT1Q99943 283 aa20.39■□□□□ 0.86
CBX1-202ENST00000393408 SEPT11Q9NVA2 429 aaKnown RBP20.39■□□□□ 0.86
CBX1-202ENST00000393408 SYNPO2Q9UMS6 1093 aa20.39■□□□□ 0.86
CBX1-202ENST00000393408 GUCY2CP25092 1073 aa20.39■□□□□ 0.85
CBX1-202ENST00000393408 COPB2P35606 906 aa20.39■□□□□ 0.85
CBX1-202ENST00000393408 UBXN2AP68543 259 aa20.39■□□□□ 0.85
CBX1-202ENST00000393408 ADAT2Q7Z6V5 191 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms