RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 UIMC1Q96RL1 719 aa13.88□□□□□ -0.19
CTSC-202ENST00000393301 JPH2Q9BR39 696 aaPredicted RBP13.88□□□□□ -0.19
CTSC-202ENST00000393301 PHF20Q9BVI0 1012 aa13.88□□□□□ -0.19
CTSC-202ENST00000393301 MRPL9Q9BYD2 267 aaKnown RBP13.88□□□□□ -0.19
CTSC-202ENST00000393301 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
CTSC-202ENST00000393301 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
CTSC-202ENST00000393301 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
CTSC-202ENST00000393301 CPLX1O14810 134 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 ST18O60284 1047 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 ZNF623O75123 536 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 CDKL5O76039 1030 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 PSMC5P62195 406 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 DRP2Q13474 957 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 ANO5Q75V66 913 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 RNF135Q8IUD6 432 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 THNSL1Q8IYQ7 743 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 SLC39A11Q8N1S5 342 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 ZNF558Q96NG5 402 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 PPP1R16BQ96T49 567 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 LLPHQ9BRT6 129 aaKnown RBP13.87□□□□□ -0.19
CTSC-202ENST00000393301 PHF7Q9BWX1 381 aaPredicted RBP13.87□□□□□ -0.19
CTSC-202ENST00000393301 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
CTSC-202ENST00000393301 INO80BQ9C086 356 aaPredicted RBP13.87□□□□□ -0.19
CTSC-202ENST00000393301 S1PR5Q9H228 398 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 TLE6Q9H808 572 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
CTSC-202ENST00000393301 TPCN1Q9ULQ1 816 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
CTSC-202ENST00000393301 PCDHGC5Q9Y5F6 944 aa13.87□□□□□ -0.19
CTSC-202ENST00000393301 CHMP2AO43633 222 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 SLC37A4O43826 429 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 DKC1O60832 514 aaKnown RBP eCLIP13.86□□□□□ -0.19
CTSC-202ENST00000393301 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 SKIP12755 728 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 HOXB8P17481 243 aaPredicted RBP13.86□□□□□ -0.19
CTSC-202ENST00000393301 SCRN1Q12765 414 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 CLUL1Q15846 466 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
CTSC-202ENST00000393301 EXOC8Q8IYI6 725 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 EDAQ92838 391 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 GTF3C6Q969F1 213 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 AIFM3Q96NN9 605 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 NAP1L4Q99733 375 aaKnown RBP13.86□□□□□ -0.19
CTSC-202ENST00000393301 SEPT9Q9UHD8 586 aaPredicted RBP13.86□□□□□ -0.19
CTSC-202ENST00000393301 DDX25Q9UHL0 483 aaKnown RBP13.86□□□□□ -0.19
CTSC-202ENST00000393301 BARX2Q9UMQ3 279 aaPredicted RBP13.86□□□□□ -0.19
CTSC-202ENST00000393301 IRAK3Q9Y616 596 aa13.86□□□□□ -0.19
CTSC-202ENST00000393301 DENND4AQ7Z401 1863 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
CTSC-202ENST00000393301 SRGAP2BP0DMP2 458 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 SFPQP23246 707 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTSC-202ENST00000393301 PHKA2P46019 1235 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 DNM2P50570 870 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 RAB27AP51159 221 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 SPIRE1Q08AE8 756 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 MTERF2Q49AM1 385 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 NEK8Q86SG6 692 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 ABI1Q8IZP0 508 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 NLRP7Q8WX94 980 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 GJA10Q969M2 543 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
CTSC-202ENST00000393301 DHX33Q9H6R0 707 aaKnown RBP13.85□□□□□ -0.19
CTSC-202ENST00000393301 SPG21Q9NZD8 308 aa13.85□□□□□ -0.19
CTSC-202ENST00000393301 KMT2EQ8IZD2 1858 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 A0A087WZ62 844 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 EML1O00423 815 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 P4HBP07237 508 aaKnown RBP13.84□□□□□ -0.19
CTSC-202ENST00000393301 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
CTSC-202ENST00000393301 KRT17Q04695 432 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 ME3Q16798 604 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 INF2Q27J81 1249 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 ANKRD54Q6NXT1 300 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 RBM23Q86U06 439 aaKnown RBP13.84□□□□□ -0.19
CTSC-202ENST00000393301 C4orf19Q8IY42 314 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 HAS1Q92839 578 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 TCF25Q9BQ70 676 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 FDXACB1Q9BRP7 624 aaPredicted RBP13.84□□□□□ -0.19
CTSC-202ENST00000393301 IFT122Q9HBG6 1241 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 MUTYHQ9UIF7 546 aa13.84□□□□□ -0.19
CTSC-202ENST00000393301 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 PER2O15055 1255 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 INPPL1O15357 1258 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 CTDNEP1O95476 244 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 XBP1P17861 261 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 RFC5P40937 340 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
CTSC-202ENST00000393301 PCBP1Q15365 356 aaKnown RBP eCLIP13.83□□□□□ -0.21e-6■□□□□ 9.1
CTSC-202ENST00000393301 EPHA7Q15375 998 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 HFE2Q6ZVN8 426 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 TRMT1LQ7Z2T5 733 aaKnown RBP13.83□□□□□ -0.2
CTSC-202ENST00000393301 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
CTSC-202ENST00000393301 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 TNFRSF25Q93038 417 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 SNX21Q969T3 373 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 MFSD14AQ96MC6 490 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 AGPAT5Q9NUQ2 364 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 SUCLA2Q9P2R7 463 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms