RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PARVGQ9HBI0 331 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 DACT1Q9NYF0 836 aa14.69□□□□□ -0.06
USP44-202ENST00000393091 ANK1P16157 1881 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 CHRNA1P02708 482 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 SELPP16109 830 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 CAPSQ13938 189 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 GPNMBQ14956 572 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 MAP7D2Q96T17 732 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 KINO60870 393 aaKnown RBP14.68□□□□□ -0.06
USP44-202ENST00000393091 AXLP30530 894 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 POU5F1Q01860 360 aaKnown RBP14.68□□□□□ -0.06
USP44-202ENST00000393091 CCDC65Q8IXS2 484 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 PRPF31Q8WWY3 499 aaKnown RBP14.68□□□□□ -0.06
USP44-202ENST00000393091 VWCEQ96DN2 955 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 RMND1Q9NWS8 449 aa14.68□□□□□ -0.06
USP44-202ENST00000393091 USO1O60763 962 aaKnown RBP14.67□□□□□ -0.06
USP44-202ENST00000393091 PPP1R2P41236 205 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 AMHR2Q16671 573 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 BSNDQ8WZ55 320 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 APBB2Q92870 758 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 CCDC51Q96ER9 411 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 INO80BQ9C086 356 aaPredicted RBP14.67□□□□□ -0.06
USP44-202ENST00000393091 LARSQ9P2J5 1176 aaKnown RBP14.67□□□□□ -0.06
USP44-202ENST00000393091 STYXL1Q9Y6J8 313 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 DARSP14868 501 aaKnown RBP14.67□□□□□ -0.06
USP44-202ENST00000393091 CUL4BQ13620 913 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 TMEM161BQ8NDZ6 487 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 ZNF507Q8TCN5 953 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 CHST12Q9NRB3 414 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 CGNQ9P2M7 1197 aaKnown RBP14.67□□□□□ -0.06
USP44-202ENST00000393091 MBTD1Q05BQ5 628 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 DRP2Q13474 957 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 FBXO47Q5MNV8 452 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 ZNF720Q7Z2F6 126 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 RSPH1Q8WYR4 309 aa14.67□□□□□ -0.06
USP44-202ENST00000393091 RPN1P04843 607 aaKnown RBP14.66□□□□□ -0.06
USP44-202ENST00000393091 IQCF3P0C7M6 154 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 NPTX2P47972 431 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 COASYQ13057 564 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 PDILTQ8N807 584 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 WNT8AQ9H1J5 351 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 ERVK-5Q9HDB9 667 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 PANK4Q9NVE7 773 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 LETM1O95202 739 aaPredicted RBP14.66□□□□□ -0.06
USP44-202ENST00000393091 SMC2O95347 1197 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 PROZP22891 400 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 PHKA2P46019 1235 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 ENPEPQ07075 957 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 MORC3Q14149 939 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 DSC3Q14574 896 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 TSHZ1Q6ZSZ6 1077 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 LRRC8DQ7L1W4 858 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 ZC3H3Q8IXZ2 948 aaKnown RBP14.66□□□□□ -0.06
USP44-202ENST00000393091 RASSF8Q8NHQ8 419 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 DNAJB3Q8WWF6 145 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
USP44-202ENST00000393091 IFT74Q96LB3 600 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 CCDC43Q96MW1 224 aaKnown RBP14.66□□□□□ -0.06
USP44-202ENST00000393091 PLIN2Q99541 437 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
USP44-202ENST00000393091 CLCN3P51790 818 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 PLEKHG4Q58EX7 1191 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 MFSD5Q6N075 450 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 C12orf56Q8IXR9 622 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 KIAA1468Q9P260 1216 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 DMP1Q13316 513 aaPredicted RBP14.65□□□□□ -0.06
USP44-202ENST00000393091 CCDC183Q5T5S1 534 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 L1TD1Q5T7N2 865 aaKnown RBP14.65□□□□□ -0.06
USP44-202ENST00000393091 ZNF618Q5T7W0 954 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 TAS1R3Q7RTX0 852 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 MAP4K3Q8IVH8 894 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 CDY2AQ9Y6F7 541 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 MYBPC2Q14324 1141 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 MBTPS1Q14703 1052 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 ZPBP2Q6X784 338 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 TMEM143Q96AN5 459 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 GCOM2Q9BZD3 368 aaPredicted RBP14.65□□□□□ -0.06
USP44-202ENST00000393091 ADGRA3Q8IWK6 1321 aa14.65□□□□□ -0.06
USP44-202ENST00000393091 NPHP3-ACAD11A0A0J9YXS1 232 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 INPPL1O15357 1258 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 TRAK2O60296 914 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 SMTNP53814 917 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 KMT5BQ4FZB7 885 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 FAM102BQ5T8I3 360 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 ZNF658Q5TYW1 1059 aaPredicted RBP14.64□□□□□ -0.07
USP44-202ENST00000393091 CRIPAKQ8N1N5 446 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 LRRC71Q8N4P6 559 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 VTI1AQ96AJ9 217 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 PTPRHQ9HD43 1115 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 PRMT7Q9NVM4 692 aaPredicted RBP14.64□□□□□ -0.07
USP44-202ENST00000393091 RSPH10B2B2RC85 870 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 TBCAO75347 108 aaKnown RBP14.64□□□□□ -0.07
USP44-202ENST00000393091 RSPH10BP0C881 870 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 EIF4BP23588 611 aaKnown RBP14.64□□□□□ -0.07
USP44-202ENST00000393091 LPIN1Q14693 890 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 HIPK3Q9H422 1215 aa14.64□□□□□ -0.07
USP44-202ENST00000393091 ABLIM1O14639 778 aa14.63□□□□□ -0.07
USP44-202ENST00000393091 FAM13AO94988 1023 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms