RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 TEX28O15482 410 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ARHGEF9O43307 516 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 H2AFYO75367 372 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 EGFRP00533 1210 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 CD4P01730 458 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 CD58P19256 250 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 GPC3P51654 580 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ARL4CP56559 192 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 HUNKP57058 714 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 OCA2Q04671 838 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 LRRC63Q05C16 580 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 NSUN2Q08J23 767 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBR3-202ENST00000392632 ELAVL2Q12926 359 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 BBS9Q3SYG4 887 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 RASIP1Q5U651 963 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 PPP1R18Q6NYC8 613 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 BANK1Q8NDB2 785 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 MRPS31Q92665 395 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 HES6Q96HZ4 224 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ZNF512Q96ME7 567 aaPredicted RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 TIPINQ9BVW5 301 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 BLZF1Q9H2G9 400 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 NCOA5Q9HCD5 579 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 SLC39A2Q9NP94 309 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 H2AFY2Q9P0M6 372 aaPredicted RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 UVRAGQ9P2Y5 699 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SYCE1LA8MT33 242 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 H7C4K7 107 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 HGSO14964 777 aaPredicted RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 TOM1L1O75674 476 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 BMP10O95393 424 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 GGPS1O95749 300 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 C6orf222P0C671 652 aaPredicted RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 DARSP14868 501 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 AKT1P31749 480 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 CYP2C19P33261 490 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 HADHAP40939 763 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 EIF3BP55884 814 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 RWDD2BP57060 319 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 MAP3K7CLP57077 242 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 NCALDP61601 193 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 CAV1Q03135 178 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SPP2Q13103 211 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 TMEM259Q4ZIN3 620 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 CAPN12Q6ZSI9 719 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 FAM47EQ6ZV65 393 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 EFL1Q7Z2Z2 1120 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 CRLF3Q8IUI8 442 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ZNF557Q8N988 423 aaPredicted RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 XXYLT1Q8NBI6 393 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 PCSK9Q8NBP7 692 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 OR6J1Q8NGC5 347 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 OR6P1Q8NGX9 317 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 WDR48Q8TAF3 677 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SCFD2Q8WU76 684 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 BTN2A2Q8WVV5 523 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 XPO6Q96QU8 1125 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 UIMC1Q96RL1 719 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ZWILCHQ9H900 591 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 EMILIN3Q9NT22 766 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 TMEM51Q9NW97 253 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ASXL1Q8IXJ9 1541 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ABCA10Q8WWZ4 1543 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 TMEM94Q12767 1356 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 KIAA0232Q92628 1395 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 UBN2Q6ZU65 1347 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 GPATCH8Q9UKJ3 1502 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 SYNDIG1LA6NDD5 238 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ZRANB2O95218 330 aaKnown RBP eCLIP4.24□□□□□ -1.73
UBR3-202ENST00000392632 GH1P01241 217 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 MARK3P27448 753 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 KRT20P35900 424 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ETFBP38117 255 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ALDH7A1P49419 539 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 TTLL9Q3SXZ7 439 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 PPP6R3Q5H9R7 873 aaPredicted RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 TMCO4Q5TGY1 634 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ERAP2Q6P179 960 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SCYL3Q8IZE3 742 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 FAM9CQ8IZT9 166 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SYNE4Q8N205 404 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SDR42E1Q8WUS8 393 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 LPAR1Q92633 364 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 PPP1R14AQ96A00 147 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 TSPAN17Q96FV3 270 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SPATA33Q96N06 139 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 BRIP1Q9BX63 1249 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 CNOT10Q9H9A5 744 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 PARVBQ9HBI1 364 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ZBTB40Q9NUA8 1239 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 THG1LQ9NWX6 298 aaKnown RBP4.24□□□□□ -1.73
UBR3-202ENST00000392632 SYBUQ9NX95 663 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 SMARCAL1Q9NZC9 954 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 OGFRQ9NZT2 677 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 ADAM22Q9P0K1 906 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 KIF24Q5T7B8 1368 aa4.24□□□□□ -1.73
UBR3-202ENST00000392632 A8MXQ7 604 aa4.23□□□□□ -1.73
UBR3-202ENST00000392632 P4HBP07237 508 aaKnown RBP4.23□□□□□ -1.73
UBR3-202ENST00000392632 SLC2A3P11169 496 aa4.23□□□□□ -1.73
UBR3-202ENST00000392632 KCNA2P16389 499 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms