RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 PEX3P56589 373 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 RTP1P59025 263 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 APBA1Q02410 837 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 BFSP1Q12934 665 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 FAM102BQ5T8I3 360 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 SWSAP1Q6NVH7 229 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 MOB2Q70IA6 237 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 MCPH1Q8NEM0 835 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 NTPCRQ9BSD7 190 aaKnown RBP21.92■■□□□ 1.1
PTPN11-202ENST00000392597 ASCC2Q9H1I8 757 aaPredicted RBP21.92■■□□□ 1.1
PTPN11-202ENST00000392597 EXOC7Q9UPT5 735 aa21.92■■□□□ 1.1
PTPN11-202ENST00000392597 IGSF9BQ9UPX0 1349 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 MYH9P35579 1960 aaKnown RBP21.91■■□□□ 1.1
PTPN11-202ENST00000392597 DGAT1O75907 488 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 SLC25A27O95847 323 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 SUPT20HL2P0C7V6 817 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 ACTN1P12814 892 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 MAGEA1P43355 309 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 CNTN2Q02246 1040 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 KLHL30Q0D2K2 578 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 DMP1Q13316 513 aaPredicted RBP21.91■■□□□ 1.1
PTPN11-202ENST00000392597 LDLRAD1Q5T700 205 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 INTS8Q75QN2 995 aaKnown RBP21.91■■□□□ 1.1
PTPN11-202ENST00000392597 TRIM58Q8NG06 486 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 GOLGA1Q92805 767 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 CLMNQ96JQ2 1002 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 CEP170P1Q96L14 293 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 SPAG5Q96R06 1193 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 TFR2Q9UP52 801 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 FHOD1Q9Y613 1164 aa21.91■■□□□ 1.1
PTPN11-202ENST00000392597 ATG7O95352 703 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 PAPD7Q5XG87 772 aaKnown RBP21.9■■□□□ 1.1
PTPN11-202ENST00000392597 CCDC60Q8IWA6 550 aaPredicted RBP21.9■■□□□ 1.1
PTPN11-202ENST00000392597 SH2D3AQ9BRG2 576 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 GPRC5CQ9NQ84 441 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 PDLIM7Q9NR12 457 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 POTEB2H3BUK9 544 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 SLC16A4O15374 487 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 KRT13P13646 458 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 PRKCIP41743 596 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 JAM2P57087 298 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 MCCD1P59942 119 aaPredicted RBP21.9■■□□□ 1.1
PTPN11-202ENST00000392597 PRKCEQ02156 737 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 SLC18A3Q16572 532 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 XKR3Q5GH77 459 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 TRAPPC11Q7Z392 1133 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 FAM133AQ8N9E0 248 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 TMEM161BQ8NDZ6 487 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 RABGGTAQ92696 567 aa21.9■■□□□ 1.1
PTPN11-202ENST00000392597 H2AFXP16104 143 aaPredicted RBP21.89■■□□□ 1.09
PTPN11-202ENST00000392597 ABCD1P33897 745 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 NPTX2P47972 431 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 CHMP4BP1P59074 171 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 GFPT1Q06210 699 aaPredicted RBP21.89■■□□□ 1.09
PTPN11-202ENST00000392597 IRF2BP2Q7Z5L9 587 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 NCAPG2Q86XI2 1143 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 FMNL3Q8IVF7 1028 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 MAP4K3Q8IVH8 894 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 GPR161Q8N6U8 529 aaKnown RBP21.89■■□□□ 1.09
PTPN11-202ENST00000392597 XXYLT1Q8NBI6 393 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 CYP26B1Q9NR63 512 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 KCNG1Q9UIX4 513 aa21.89■■□□□ 1.09
PTPN11-202ENST00000392597 N4BP1O75113 896 aaKnown RBP21.88■■□□□ 1.09
PTPN11-202ENST00000392597 TACC1O75410 805 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 CNMDO75829 334 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 SP2Q02086 613 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 C10orf76Q5T2E6 689 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 FASTKD5Q7L8L6 764 aaKnown RBP21.88■■□□□ 1.09
PTPN11-202ENST00000392597 RNF10Q8N5U6 811 aaKnown RBP21.88■■□□□ 1.09
PTPN11-202ENST00000392597 HSPBP1Q9NZL4 362 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 TBX20Q9UMR3 447 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 DUSP10Q9Y6W6 482 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 P4HA2O15460 535 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 RFX1P22670 979 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 FBXO38Q6PIJ6 1188 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 ATP6V0A4Q9HBG4 840 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 KMT5AQ9NQR1 393 aa21.88■■□□□ 1.09
PTPN11-202ENST00000392597 MAFBQ9Y5Q3 323 aaPredicted RBP21.88■■□□□ 1.09
PTPN11-202ENST00000392597 MACROD2A1Z1Q3 448 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 SOWAHBA6NEL2 793 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 TMEM88BA6NKF7 163 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 H0YCG3 227 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 TGFB3P10600 412 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 SCP2P22307 547 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 MYL7Q01449 175 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 MOGSQ13724 837 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 SAPCD2Q86UD0 394 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 MPHOSPH6Q99547 160 aaKnown RBP21.87■■□□□ 1.09
PTPN11-202ENST00000392597 CBWD1Q9BRT8 395 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 SEPT9Q9UHD8 586 aaPredicted RBP21.87■■□□□ 1.09
PTPN11-202ENST00000392597 SAR1BQ9Y6B6 198 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 ATP8B3O60423 1300 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 SYNGAP1Q96PV0 1343 aa21.87■■□□□ 1.09
PTPN11-202ENST00000392597 LRRC37A2A6NM11 1700 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 CCDC169A6NNP5 214 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 CBWD6Q4V339 395 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 CBWD3Q5JTY5 395 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 CBWD5Q5RIA9 395 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 CYFIP1Q7L576 1253 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 TRMT1LQ7Z2T5 733 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms